Transcript Information: R_Transcript_98076.p1


Annotated TAIR IDAT1G47550.2
Annotated Gene Nameexocyst complex component sec3A
Annotated Gene Symbol(s)SEC3A
Annotation TypeOrtholog
Chromosome Positionchr1:17457171-17463896 | Forward length=888
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.431735096888
Replicate 216.120927263773
Replicate 320.623590694455
Condition 2: 8 Hour
Replicate 113.945947176963
Replicate 218.319758616875
Replicate 321.272971920935
Condition 3: 24 Hour
Replicate 120.946170230753
Replicate 218.818232941686
Replicate 319.226658443474


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98076.p1 GENE.R_Transcript_98076~~R_Transcript_98076.p1 ORF type:complete len:913 (+),score=201.77,Sec3_C|PF09763.5|7.4e-49,Sec3_C|PF09763.5|1.7e-42,Sec3-PIP2_bind|PF15277.2|6.2e-17,Vps52|PF04129.8|5.1e-08,Vps52|PF04129.8|92 R_Transcript_98076:76-2739(+)
ATGGCGAAATCTAGCGTCGATGATCAAGAACTCCGGCGAGCATGTGAAGCCGCCATTGAAGGCACCAAACAGAAGGTCATCATGTCGATCCGTGTCGCTAAGAGTCGCGGTGTTTGGGGGAAATCCGGCAAATTAGGCCGTCAAATGGCCAAACCTAGGGTTCTTGCCATTTCCATAAAACAAAAGGCACAGCGGACGAAAGCGTTCCTTCGTGTTCTAAAATATTCCACAGGAGGTGTTCTTGAGCCAGCAAAAATATACAAGCTGAAGCATCTCTCGAAGGTGGAGGTCAATACCAATGATCCCAGTGGATGTACATTTACTTTGGGGTTCGATAACCTTCGAAACCAAACAGTTGCTCCACCACAGTGGACTATGAGAAATGTTGATGATAGGAACCGCCTTCTACTTTGTATATTAAACGTGTGTAAAGATATGCTTGGTCGTCTACCTAAAGTTGTTGGAATTGATGTTGTGGAGATGGCTCTTTGGGCAAAGGAGAACACTACCACCACTACTACCGATCAGGTGAAATCGGATGATGGTCCTGTTCCTACTACGGTTACTGAAAAGGACATGCAGGTTACTGTTGAAAAGGAGCTTGTATCTCAAGCTGAGGAAGAAGACATGGAAGCTCTTCTTGGCACGTACGTCATGGGTATTGGTGAAGCGGAGGCTTTTTCTGAGAGGCTAAAGCGTGAGCTTCAAGCTTTGGAAGCAGCAAATGTGCATGCTATACTGGAGACAGAACCCTTGGTTGAACAGGTATCAAGAGGGCTTGATAATGCCTTGAACTGTGTGGACGATATGGATGAATGGTTAGGGATTTTCAATGTGAAACTCAGACACATGAGAGAAGACATCGAGTCGATAGAAACCCGAAATAACAAGCTGGAAATGCAATCTGTAAATAACAAATCATTGATTGAAGAACTTGACAAGCTTCTGGAGCGGCTACGTATTCCTTCTGAGTATGCAGCATGTCTGACAGGAGGCTCCTTTGATGAAGCAAACATGATTAAAAACATAGAAGCATGCGAATGGCTAAGTGGTGCTCTTCATGGTGTAGAAGTTCCCAATCTGGATCCTACTTTCAAAAACATGCGAGCTGTACGAGAGAAGAAAGCTGAGCTCGAAAAGCTTAAAAGTACTTTTGTTCGTAGAGCATCTGAGTTCTTGAGGAACTACTTTGCCAGCTTGGTAGATTTCATGATAAGTGACAAGAGTTATTTTTCTCAACGTGGACAGCTGAAACGACCTGACCATGCTGATCTGCGGTACAAGTGTAGGACATATGCTCGCCTTCTTCAACATCTGAAGAGTCTTGATAAGAATTGCTTGGGTCCATTGAGGAAAGCATACTGTGCCTCTCTCAACTTACTCCTTCGAAGAGAGGCTCGGGAGTTTGCTAATGAGCTTCGAGCAAGCACTAAAGCTTCAAGGAATCCAACTGTTTGGCTGGATGCTGCTGCTGGTGCTGGCCAGAATGTTAGCAATGCAGACACTTCAGCAGTTTCTGATGCTTATGCCAAAATGCTTACAATATTTGTTCCCCTCCTTGTAGATGAGAGCTCCTTTTTTGCTCACTTCATGTGCTTTGAAGTTCCTGCACTTAATCCACCGGGAAGTGTTCCCAATGGCAAGTCTGCGTCAAATGGTGATGATGCCGATGATGATGATGATCTGGGAATTATGGATATTGATGACAGTGATAGTAAAAATGGTAAAAATTCTGTAGAGTTGGTGGCATTAAATGAATGTCTTCAAGAGTTGCTAGATGGAATCCAGGAAGACTTCTATGCTGTCGTGGATTGGGCATACAAAATTGACCCTCTGCGATGTATATCAATGCATGGGATTACAGAACGTTATCTTTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTGCGCCTCTTGCTTGGCGACCTTGAATCAAGGATTTCCATGCAGTTCAGTAGATTTGTTGATGAAGCTTGTCATCAGATTGAAAGAAATGAGCGCAATGTCCGGCAAATGGGTGTTCTGTCATACATCCCAAGATTTGCTACACTTGCAACTCGTATGGAGCAGTACATTCAGGGACAATCCAGGGATTTGGTCGATCAGGCATATACAAAATTTGTCAGCATAATGTTTGTGACCTTGGAGAAAATTGCACAGACAGATCCAAAATACGCAGATGTCTTCCTTTTGGAGAATTATGCTGCATTTCAGAACAGCTTGTATGACCTTGCAAATGTTGTACCAACTCTAGCAAAGTTCTATCACCAAGCTAGCGAAGCATATGAACAAGCTTGCACGCGCCATATAAGTATGATCATATATTATCAATTTGAACGGCTCTTCCAATTTGCTAGAAGGATTGAAGATCTGATGTACACCATAACGCCAGAAGAGATTCCTTTCCAGCTTGGTTTGTCGAAAATGGATCTCAGGAAGGTGTTGAAAGCTAGCTTGTCTGGGGTTGACAAATCAATCCAAGCAATGTACAAGAAATTGCAGAAAAACTTAACTTCTGAGGAATTGCTACCTTCTTTATGGGACAAATGCAAGAAAGAGTTTCTCGACAAATACGAGAGCTTTGCTCAACTTGTTGCCAAAGTTTATCCTACTGAGAATATCCCCTCCGTATCAGAAATGAGAGATCTTTTGGCCTCCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98076.p1 GENE.R_Transcript_98076~~R_Transcript_98076.p1 ORF type:complete len:913 (+),score=201.77,Sec3_C|PF09763.5|7.4e-49,Sec3_C|PF09763.5|1.7e-42,Sec3-PIP2_bind|PF15277.2|6.2e-17,Vps52|PF04129.8|5.1e-08,Vps52|PF04129.8|92 R_Transcript_98076:76-2739(+)
MAKSSVDDQELRRACEAAIEGTKQKVIMSIRVAKSRGVWGKSGKLGRQMAKPRVLAISIKQKAQRTKAFLRVLKYSTGGVLEPAKIYKLKHLSKVEVNTNDPSGCTFTLGFDNLRNQTVAPPQWTMRNVDDRNRLLLCILNVCKDMLGRLPKVVGIDVVEMALWAKENTTTTTTDQVKSDDGPVPTTVTEKDMQVTVEKELVSQAEEEDMEALLGTYVMGIGEAEAFSERLKRELQALEAANVHAILETEPLVEQVSRGLDNALNCVDDMDEWLGIFNVKLRHMREDIESIETRNNKLEMQSVNNKSLIEELDKLLERLRIPSEYAACLTGGSFDEANMIKNIEACEWLSGALHGVEVPNLDPTFKNMRAVREKKAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCASLNLLLRREAREFANELRASTKASRNPTVWLDAAAGAGQNVSNADTSAVSDAYAKMLTIFVPLLVDESSFFAHFMCFEVPALNPPGSVPNGKSASNGDDADDDDDLGIMDIDDSDSKNGKNSVELVALNECLQELLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLESRISMQFSRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFVTLEKIAQTDPKYADVFLLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDLMYTITPEEIPFQLGLSKMDLRKVLKASLSGVDKSIQAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVAKVYPTENIPSVSEMRDLLASM*

Click here to download the sequence:
Link to NCBI Protein BLAST