Transcript Information: R_Transcript_98080.p1


Annotated TAIR IDAT2G31170.1
Annotated Gene NameCysteinyl-tRNA synthetase, class Ia family protein
Annotated Gene Symbol(s)SYCO ARATH
Annotation TypeOrtholog
Chromosome Positionchr2:13282559-13285616 | Reverse length=563
E-Value2.3E-293
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4803411673558
Replicate 23.9342180267225
Replicate 34.608456084433
Condition 2: 8 Hour
Replicate 13.4289870044466
Replicate 23.8811787022176
Replicate 34.4036451800939
Condition 3: 24 Hour
Replicate 15.3885188562067
Replicate 24.1326421984316
Replicate 34.4897855767995


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98080.p1 GENE.R_Transcript_98080~~R_Transcript_98080.p1 ORF type:5prime_partial len:507 (+),score=104.08,tRNA-synt_1e|PF01406.15|4.8e-128,tRNA-synt_1g|PF09334.7|6.1e-05,tRNA-synt_1g|PF09334.7|0.00027 R_Transcript_98080:1-1521(+)
GAGGGTCAAAGTAAGAAAGATTTGTTTTTGTATAATACTATGAGTAGACAAAAGGAGTTGTTTAAGCCTAAAGTGGCTGGTAAAGTGGGCATGTATGTTTGTGGGGTTACTGCCTATGATTTTAGCCATATTGGTCATGCTCGAGCCTATGTCACCTTTGATGTCCTTTACAGGTATCTCAAGTATCTTGAATACGAAGTTTGTTATGTACGAAACTTTACTGACGTGGATGACAAGATAATTGCCAGAGCCAATGAACTGGGGGAGAATCCAATATCTTTGAGCAAACGATTTTGTGACGAATTTCTCCGAGACATGGCCTCTCTTCATTGTTTACCTCCTTCCATAGAACCTCGTGTATCTGATCACATTCCACAAATTATAGACATGATTAAACAGATAATTGCCAATGGCTTTGCCTATTCTGTTGATGGGGATGTCTACTTCTCTGTGGAGGGGTTTCCTGATTATGGAAGATTGTCGGGACGGAAGTTGGAGGATAATCGAGCCGGTGAACGGGTTGCTGTGAACTCAAGAAAGAAAAATCCTGCTGATTTTGCATTGTGGAAATCTGCCAAAGCTGGAGAGCCATATTGGGAGAGTCCATGGGGTCCTGGTAGACCTGGATGGCATATTGAATGCAGTGCCATGAGTGCTGTATATTTGGGTTATTCTTTTGACATACATGGTGGTGGGATGGACCTCATGTTCCCCCACCATGAAAATGAAATTGTTCAGAGCTGCGCTGCATGTCGTGAAAGCAATATAAGCTATTGGGTACATAATGGATTTGTCACTATTAACTCAGAGAAAATGTCCAAATCGCTTGGTAACTTCTTCACAATTCGGGAGGTTATAGAACTTTATCATCCACTTGCTTTGAGACTCTTCCTGATGGGAACCCACTATCGATCTCCAATAAATTACTCTGATTCTCTGCTAGAAAGTGCATCTGAACGTGTTTTCTACGTATACCAGACATTACAGGATTGCGAAGAAATTCTGAGACAGCATGATGGAGCTAGTCTGAAGAACTCTGTTCCCCAGGATATTGCAAGTTGTGTCAATAAATTCTACAATGATTTTGTGGTTTCAATGTCTGATGATCTTCACACCCCTGTTGTTCTTGCTGCGCTTTCTGATCCACTGAAGACCATTAATGATCTTCTTCATACACGTAAGGGGAAGAAGCGAAAGTTGCGACTAGAATCACTTGCAGCCTTGGAGAAAAGCATCAGAAATGTGCTGATTGTTCTAGGATTGATGCCACCAAGCTATTCAGAGGTTCTTCTCCAACTGAAAGAATTTGCTTTAAAGCGTACCAAGATGTCAGAAGCTGAAGTTCTGCAAATGATGGAAGAGAGAGATACAGCAAGGAAGAACAAAGAATATGAGAAGTCAGATGCAATCAGAAAACAGCTGGCTGCTGTAGGGATTGCTTTGATGGACAGCCCTGGAGGGACGACCTGGAGACCTGTAATTCCTACTGCACTTCAACAAGAGCCTGTAATGAGCAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98080.p1 GENE.R_Transcript_98080~~R_Transcript_98080.p1 ORF type:5prime_partial len:507 (+),score=104.08,tRNA-synt_1e|PF01406.15|4.8e-128,tRNA-synt_1g|PF09334.7|6.1e-05,tRNA-synt_1g|PF09334.7|0.00027 R_Transcript_98080:1-1521(+)
EGQSKKDLFLYNTMSRQKELFKPKVAGKVGMYVCGVTAYDFSHIGHARAYVTFDVLYRYLKYLEYEVCYVRNFTDVDDKIIARANELGENPISLSKRFCDEFLRDMASLHCLPPSIEPRVSDHIPQIIDMIKQIIANGFAYSVDGDVYFSVEGFPDYGRLSGRKLEDNRAGERVAVNSRKKNPADFALWKSAKAGEPYWESPWGPGRPGWHIECSAMSAVYLGYSFDIHGGGMDLMFPHHENEIVQSCAACRESNISYWVHNGFVTINSEKMSKSLGNFFTIREVIELYHPLALRLFLMGTHYRSPINYSDSLLESASERVFYVYQTLQDCEEILRQHDGASLKNSVPQDIASCVNKFYNDFVVSMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKRKLRLESLAALEKSIRNVLIVLGLMPPSYSEVLLQLKEFALKRTKMSEAEVLQMMEERDTARKNKEYEKSDAIRKQLAAVGIALMDSPGGTTWRPVIPTALQQEPVMSS*

Click here to download the sequence:
Link to NCBI Protein BLAST