Transcript Information: R_Transcript_98272.p1


Annotated TAIR IDAT1G08590.1
Annotated Gene NameLeucine-rich receptor-like protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2718859-2721948 | Forward length=1029
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2611475693013
Replicate 24.6109522482851
Replicate 36.0410906013382
Condition 2: 8 Hour
Replicate 12.5446094945176
Replicate 21.4249581565461
Replicate 31.5304299150522
Condition 3: 24 Hour
Replicate 13.6912552797485
Replicate 26.3787268360003
Replicate 32.7252338188588


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98272.p1 GENE.R_Transcript_98272~~R_Transcript_98272.p1 ORF type:complete len:1020 (+),score=180.90,LRR_8|PF13855.2|2.7e-08,LRR_8|PF13855.2|0.0054,LRR_8|PF13855.2|1.6e-06,LRR_8|PF13855.2|1.8e-05,LRR_8|PF13855.2|0.00011,LRR_8|PF13855.2|5.2e-07,LRR_8|PF13855.2|3.7e-09,LRR_8|PF13855.2|0.00012,Pkinase|PF00069.21|1e-46,Pkinase_Tyr|PF07714.13|1.2e-41,LRR_4|PF12799.3|0.092,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|2.2,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|0.0016,LRR_4|PF12799.3|0.00036,LRR_4|PF12799.3|8.9e-05,LRR_4|PF12799.3|0.57,LRR_4|PF12799.3|1,LRR_4|PF12799.3|0.18,LRR_4|PF12799.3|1e+02,LRR_4|PF12799.3|8.3,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|0.00016,LRR_4|PF12799.3|0.45,LRR_1|PF00560.29|3.9,LRR_1|PF00560.29|5.6e+02,LRR_1|PF00560.29|48,LRR_1|PF00560.29|1.9e+03,LRR_1|PF00560.29|49,LRR_1|PF00560.29|11,LRR_1|PF00560.29|3.3e+02,LRR_1|PF00560.29|18,LRR_1|PF00560.29|2.5e+02,LRR_1|PF00560.29|6.2,LRR_1|PF00560.29|6.8e+02,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|4.3,LRR_1|PF00560.29|1.8e+03,LRR_1|PF00560.29|0.54,LRR_1|PF00560.29|3.8e+02,LRR_1|PF00560.29|13,LRR_1|PF00560.29|11,LRR_1|PF00560.29|5.4,LRR_1|PF00560.29|3.9e+03,LRRNT_2|PF08263.8|2.9e-09,LRRNT_2|PF08263.8|9.6e+03 R_Transcript_98272:116-3175(+)
ATGAAAATGCAAAACCAAGTTTTGATGTTCTGTTTGTGCTACTGTTCCATTGGTGTATTTCTTGTATCAGCTGTTAGTACACCAAATGATGAACTATCATCTCTTCTTTCAATCAAAGAATCCTTCATTGATCCATTAAATAACCTCAAAGATTGGAATACTTCTCAAAATTCTTCCCCACATTGTGAATGGAAGGGTGTTTGGTGCAACACAAGAGGTTTTGTAGAGAAGCTTGATCTTTCCAACATGAACTTGAGTGGAAAAATCCCAGATTCCATACAAGGCCTTACAAGCTTAACAAGCTTAAATCTTTGTTGCAATGCATTTTCATCTTCATTGCCGAAAACTCTCTCGAATCTCACCTCCTTAGTGAGCCTTGATCTTAGCCAAAATGACTTCATTGGGAGTTTTCCTTATGGTTTTGGCAGAGCCAAGGGACTCATTACTCTTAATGCTTCGAGCAACAACTTTGTGGGTTCGATCCCTGATGACCTCGGCTTTGCTTTCTCCCTCGAGGTCTTAGACTTTCGAGGGAGTTTCTTCGATGGGGGGATTCCAACCACTTTCATGAACCTTCAGAAGTTGAAGTTCTTAGGCTTGTCAGGTAATAATCTCACTGGTGAACTTCCTCCTGAACTTGGGCATCTTTCGTCTTTAGAGACTATGATTCTTGGCTATAATTTCTTAAAAGGGTCAATTCCCTCGGAATTTGGGAACCTTAGTAATCTTCAGTACTTGGATTTGGCTATTAACAACTTAAGTGGTCAGATTCCTGCAGAACTTAGTAAGTTACAGAAGCTTACTACAGTTTATCTTTATCAGAACAGTTTTGAAGGGAAGATTCCTAAGGAATTGGGGAATATTTCATCGTTGTTATACTTGGATCTTTCGGATAATCAAATTTCCGGAGAGATTCCGAAGGATTTAGGAGGGCTGAAGAATCTGGAGCTTTTGAATTTGATGTGCAACCGTCTGACAGGTCGAGTACCTGATAAGCTTGGTGAGTTAACCAAGTTGCAAGTACTTGAACTGTGGAAAAATTCTCTGACAGGTCCTTTGCCTGTGAATTTAGGTAAGAATTCCCCTTTGCAATGGCTTGATGTTTCATCAAACTCTTTGTCAGGTGAACTTCCTGCTAGTCTTTGTGATTTTGGGAATCTCACCAAACTTATTCTTTTTAACAATACATTTTCTGGGCCCATCCCTTTAGGCCTAGCAAAATGTGCTTCCTTAGTCAGAGTTAGAATACAGAACAATCACTTCTCTGGGCCTATTCCTACTGGTTTAGGCACTCTCCCTAAACTTGAGAGATTAGAATTGGAGAACAACAATCTGACTGGAGTTATCCCTGATGATTTCTCACTTTCCTTGTCACTTTCCTTCATAGATGTCTCATCCAATCATCTTACATCGTCTCTCCCTTCAGGCATTCTTTCTATTCCTAATCTTCAGAATTTCTTAGCTTCTAAGAACAACTTAGATGGCCATATTCCTGATCAGTTTCAAGACTGCCCTTCTCTTAGTGTCATTGATCTTTCCGAAAACCATCTCTCTGGGAAAATCCCAAAAAGTATCGCTTCTTGCGAAAGGCTGGTTACCTTAAATCTGAGGGGAAACCAGCTCTCGGGTGAAATTCCTAGAGTGCTTGCAGGAATGCCTACTTTAGCAGTCCTTGACTTATCCAACAACTCCTTGATGGGTCAAATACCTGAAAACTTTGGGAGTTCGCCTGCTTTGGAAATGTTCAATGTGTCTTACAACAAGCTTGAAGGTCCTGTACCCACAAACGGCATGTTCACCACTATCAACCCCAATGAACTTACAGGCAATGCTGGTCTTTGTGGAGGCATACTGCCACCATGTTCAAAGATCAATGCTAGATCATCGGCTCAATGGAGAAATAAGCATGTACATCATGTCATCATTGGGTTTGTGGTTGGATTATCGGTAATCTTAGGTATTGGGTTAGCATTTTTGGCCGGGAGGATGGTGTACAGAAGATGGTATTTGTATAGCAGTACAGTAGAAGAGTGGTTCACTAGGAACAATAAGGAATGGCCTTGGAGACTTGTAGCATTCCAAAGGCTGAATTTCACGAGTGCTGATATCTTAGCTTGTTTGAAGGAATCAAATGTCATAGGAATGGGTGGGACTGGGATCGTCTACAAGGCTGAGATTCAACGGCCACATTCAGTCATTGCAGTGAAGAAGCTATGGAGATCACAGGGTGATGTCGAGGCTGGGGATAACTTGTTAGCAGAAGTAGATCTCCTAGGAAGACTGAGGCATAGGAATATAGTGAGGCTCATAGGGTACTTGCATAATGAAACTGATATTATGATGGTTTATGAGTATATGCCAAATGGGAATCTGGGAACTGCATTGCATGGCAGTAAACAATGTCAGAAGAACAGTATGCTAGTAGACTGGGTGTCGAGGTACAACATAGCACTTGGAGTAGCTCAAGGACTGGCTTATCTTCACCATGATTGTCATCCTGCAGTCATTCATCGCGATGTTAAGTCAAACAATATACTGCTGGATGCAAATTTCGAGGCACGAATTGCTGATTTTGGCCTTGCCAAGATGATGATCCACAAGAATGAGACCGTCTCCATGGTTGCAGGATCATATGGGTACATAGCACCTGAATATGGATATAGCCTAAAGGTCGACGAGAAAAGTGACATCTACAGCTTTGGAGTTGTGCTCCTAGAGCTCGTGACAGGAAGGAGACCTCTTGACCCTGCTTTTGGAGAATCAATCGATTTAGTCGAGTGGGTTCGAGAGAAGATGAAGCAAAAACGAGGCTCAGAGGAAGTACTCGATCCAGATGTTGCAGGGCAATGCAAGTACATTCAGGAGGAGATGCTTCTCGTCCTGAGGATCGCTCTGCTTTGCACTGCAAAGCTTCCAAAGGAGAGGCCATCCATGAGGGATGTCATAACGATGCTCAGAGAGGCTAAACCTCGAAGGAAGAGTGTCTGCAACAACAATGGATATAACCCTAACATTGATAAGCCCATCTTTAGCGCACCTCCAATTACTGGTCTCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98272.p1 GENE.R_Transcript_98272~~R_Transcript_98272.p1 ORF type:complete len:1020 (+),score=180.90,LRR_8|PF13855.2|2.7e-08,LRR_8|PF13855.2|0.0054,LRR_8|PF13855.2|1.6e-06,LRR_8|PF13855.2|1.8e-05,LRR_8|PF13855.2|0.00011,LRR_8|PF13855.2|5.2e-07,LRR_8|PF13855.2|3.7e-09,LRR_8|PF13855.2|0.00012,Pkinase|PF00069.21|1e-46,Pkinase_Tyr|PF07714.13|1.2e-41,LRR_4|PF12799.3|0.092,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|2.2,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|0.0016,LRR_4|PF12799.3|0.00036,LRR_4|PF12799.3|8.9e-05,LRR_4|PF12799.3|0.57,LRR_4|PF12799.3|1,LRR_4|PF12799.3|0.18,LRR_4|PF12799.3|1e+02,LRR_4|PF12799.3|8.3,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|0.00016,LRR_4|PF12799.3|0.45,LRR_1|PF00560.29|3.9,LRR_1|PF00560.29|5.6e+02,LRR_1|PF00560.29|48,LRR_1|PF00560.29|1.9e+03,LRR_1|PF00560.29|49,LRR_1|PF00560.29|11,LRR_1|PF00560.29|3.3e+02,LRR_1|PF00560.29|18,LRR_1|PF00560.29|2.5e+02,LRR_1|PF00560.29|6.2,LRR_1|PF00560.29|6.8e+02,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|4.3,LRR_1|PF00560.29|1.8e+03,LRR_1|PF00560.29|0.54,LRR_1|PF00560.29|3.8e+02,LRR_1|PF00560.29|13,LRR_1|PF00560.29|11,LRR_1|PF00560.29|5.4,LRR_1|PF00560.29|3.9e+03,LRRNT_2|PF08263.8|2.9e-09,LRRNT_2|PF08263.8|9.6e+03 R_Transcript_98272:116-3175(+)
MKMQNQVLMFCLCYCSIGVFLVSAVSTPNDELSSLLSIKESFIDPLNNLKDWNTSQNSSPHCEWKGVWCNTRGFVEKLDLSNMNLSGKIPDSIQGLTSLTSLNLCCNAFSSSLPKTLSNLTSLVSLDLSQNDFIGSFPYGFGRAKGLITLNASSNNFVGSIPDDLGFAFSLEVLDFRGSFFDGGIPTTFMNLQKLKFLGLSGNNLTGELPPELGHLSSLETMILGYNFLKGSIPSEFGNLSNLQYLDLAINNLSGQIPAELSKLQKLTTVYLYQNSFEGKIPKELGNISSLLYLDLSDNQISGEIPKDLGGLKNLELLNLMCNRLTGRVPDKLGELTKLQVLELWKNSLTGPLPVNLGKNSPLQWLDVSSNSLSGELPASLCDFGNLTKLILFNNTFSGPIPLGLAKCASLVRVRIQNNHFSGPIPTGLGTLPKLERLELENNNLTGVIPDDFSLSLSLSFIDVSSNHLTSSLPSGILSIPNLQNFLASKNNLDGHIPDQFQDCPSLSVIDLSENHLSGKIPKSIASCERLVTLNLRGNQLSGEIPRVLAGMPTLAVLDLSNNSLMGQIPENFGSSPALEMFNVSYNKLEGPVPTNGMFTTINPNELTGNAGLCGGILPPCSKINARSSAQWRNKHVHHVIIGFVVGLSVILGIGLAFLAGRMVYRRWYLYSSTVEEWFTRNNKEWPWRLVAFQRLNFTSADILACLKESNVIGMGGTGIVYKAEIQRPHSVIAVKKLWRSQGDVEAGDNLLAEVDLLGRLRHRNIVRLIGYLHNETDIMMVYEYMPNGNLGTALHGSKQCQKNSMLVDWVSRYNIALGVAQGLAYLHHDCHPAVIHRDVKSNNILLDANFEARIADFGLAKMMIHKNETVSMVAGSYGYIAPEYGYSLKVDEKSDIYSFGVVLLELVTGRRPLDPAFGESIDLVEWVREKMKQKRGSEEVLDPDVAGQCKYIQEEMLLVLRIALLCTAKLPKERPSMRDVITMLREAKPRRKSVCNNNGYNPNIDKPIFSAPPITGLL*

Click here to download the sequence:
Link to NCBI Protein BLAST