Transcript Information: R_Transcript_98325.p1


Annotated TAIR IDAT5G19730.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6670562-6673202 | Forward length=383
E-Value1.9E-211
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 151.869232053383
Replicate 235.455494106677
Replicate 342.368398561749
Condition 2: 8 Hour
Replicate 18.334238992598
Replicate 27.4929604058854
Replicate 37.5671622111376
Condition 3: 24 Hour
Replicate 138.101479541493
Replicate 241.608206086445
Replicate 347.009476557083


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98325.p1 GENE.R_Transcript_98325~~R_Transcript_98325.p1 ORF type:complete len:379 (+),score=47.24,Pectinesterase|PF01095.15|9.3e-76 R_Transcript_98325:298-1434(+)
ATGATGTGTAGAAAGAAGTCATTCATACTACTATTTCTCCTTGTTTTGTTACATTGCTTGACCAAACAACAAAGTTTATGCCATGCTAGAGCCACAAAACATAAATACAAGTTAACAGTAAACATGACACAATTTGTAGATTCAGAAGAGCAATTCATGAAGTGGGTAAAATTTGTTGGTAGTCTTAAACATAGCCTTTTCAAAACAGCCAAGAACAAAGTCTTCCCTTCTTTCTCTTTAACTGTTAGTAAAAACCCTGTAACTGGGGATTTCACCACTATCCAAGAAGCCATTGATTCTCTTCCCGCCATTAATCTTGTTCGAGTTGTCATCAAAGTCAAAGCTGGCATTTACGAGGAGAAGGTGAATATACCCCCACAAAAAGCGTTCATAACCATAGAAGGAGAAGGGGCAGATGAAACAATAGTTCAATGGGGAGACACAGCTCAAACACCAGGGCCCAATGGGAAACCTATGGGGACCTTTAATTCTGCTACCTTTGCTGTTAATTCACCTTATTTCATGGCCAAGAACATCACCTTCAAGAATACAACGCCAGTGCCACCACCGGGAGCAGTAGGAAAGCAGGCAGTGGCGTTTCGAATATCGGCAGACACGGCGGCGTTAATAGGGTGTAAGTTCTTGGGTGGGCAAGACACCCTTTATGATCATGTAGGCAGGCATTATTACAAGGACTGTTACATTGAGGGTTCTGTTGATTTCATCTTTGGCAATGGCCTTTCTCTTTTTGAGGGGTGCCATGTGCACGCAATAGCACAGAACTATGGGGCACTAACAGCACAAGGGAGGAGTAGCATGTTGGATGACACGGGGTTTTCATTCGTAAACTGTAAAGTCACGGGCTCCGGAGCTTTGTATCTTGGAAGGGCATGGGGTCCTTTTTCTACAGTCATCTTTGCCTACACTTATATGGACAACATTATCATTCCCAAAGGCTGGTACAACTGGGGTGATCCTAACCGTGAAATGACGGTGTTTTATGGACAATACAAGTGTACAGGACCAGGGGCAAATTTTGCAGGGAGGGTAGCATGGTCAAGGGAACTCACAGATGAAGAAGCCAAGCCTTTTGTTTCACTTAGCTTCATTGATGGTGCTGAATGGGTTACCTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98325.p1 GENE.R_Transcript_98325~~R_Transcript_98325.p1 ORF type:complete len:379 (+),score=47.24,Pectinesterase|PF01095.15|9.3e-76 R_Transcript_98325:298-1434(+)
MMCRKKSFILLFLLVLLHCLTKQQSLCHARATKHKYKLTVNMTQFVDSEEQFMKWVKFVGSLKHSLFKTAKNKVFPSFSLTVSKNPVTGDFTTIQEAIDSLPAINLVRVVIKVKAGIYEEKVNIPPQKAFITIEGEGADETIVQWGDTAQTPGPNGKPMGTFNSATFAVNSPYFMAKNITFKNTTPVPPPGAVGKQAVAFRISADTAALIGCKFLGGQDTLYDHVGRHYYKDCYIEGSVDFIFGNGLSLFEGCHVHAIAQNYGALTAQGRSSMLDDTGFSFVNCKVTGSGALYLGRAWGPFSTVIFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGANFAGRVAWSRELTDEEAKPFVSLSFIDGAEWVTL*

Click here to download the sequence:
Link to NCBI Protein BLAST