Transcript Information: R_Transcript_98327.p1


Annotated TAIR IDAT5G19730.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6670562-6673202 | Forward length=383
E-Value4.3E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3246464596095
Replicate 21.3497621696192
Replicate 32.8633421995191
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.65593734936297
Replicate 20.94522538102474
Replicate 31.7979185992808


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98327.p1 GENE.R_Transcript_98327~~R_Transcript_98327.p1 ORF type:complete len:280 (+),score=35.87,Pectinesterase|PF01095.15|2.6e-46 R_Transcript_98327:298-1137(+)
ATGATGTGTAGAAAGAAGTCATTCATACTACTATTTCTCCTTGTTTTGTTACATTGCTTGACCAAACAACAAAGTTTATGCCATGCTAGAGCCACAAAACATAAATACAAGTTAACAGTAAACATGACACAATTTGTAGATTCAGAAGAGCAATTCATGAAGTGGGTAAAATTTGTTGGTAGTCTTAAACATAGCCTTTTCAAAACAGCCAAGAACAAAGTCTTCCCTTCTTTCTCTTTAACTGTTAGTAAAAACCCTGTAACTGGGGATTTCACCACTATCCAAGAAGCCATTGATTCTCTTCCCGCCATTAATCTTGTTCGAGTTGTCATCAAAGTCAAAGCTGGCATTTACGAGGAGAAGGTGAATATACCCCCACAAAAAGCGTTCATAACCATAGAAGGAGAAGGGGCAGATGAAACAATAGTTCAATGGGGAGACACAGCTCAAACACCAGGGCCCAATGGGAAACCTATGGGGACCTTTAATTCTGCTACCTTTGCTGTTAATTCACCTTATTTCATGGCCAAGAACATCACCTTCAAGAATACAACGCCAGTGCCACCACCGGGAGCAGTAGGAAAGCAGGCAGTGGCGTTTCGAATATCGGCAGACACGGCGGCGTTAATAGGGTGTAAGTTCTTGGGTGGGCAAGACACCCTTTATGATCATGTAGGCAGGCATTATTACAAGGACTGTTACATTGAGGGTTCTGTTGATTTCATCTTTGGCAATGGCCTTTCTCTTTTTGAGGACGGTGTTTTATGGACAATACAAGTGTACAGGACCAGGGGCAAATTTTGCAGGGAGGGTAGCATGGTCAAGGGAACTCACAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98327.p1 GENE.R_Transcript_98327~~R_Transcript_98327.p1 ORF type:complete len:280 (+),score=35.87,Pectinesterase|PF01095.15|2.6e-46 R_Transcript_98327:298-1137(+)
MMCRKKSFILLFLLVLLHCLTKQQSLCHARATKHKYKLTVNMTQFVDSEEQFMKWVKFVGSLKHSLFKTAKNKVFPSFSLTVSKNPVTGDFTTIQEAIDSLPAINLVRVVIKVKAGIYEEKVNIPPQKAFITIEGEGADETIVQWGDTAQTPGPNGKPMGTFNSATFAVNSPYFMAKNITFKNTTPVPPPGAVGKQAVAFRISADTAALIGCKFLGGQDTLYDHVGRHYYKDCYIEGSVDFIFGNGLSLFEDGVLWTIQVYRTRGKFCREGSMVKGTHR*

Click here to download the sequence:
Link to NCBI Protein BLAST