Transcript Information: R_Transcript_98411.p1


Annotated TAIR IDAT5G48150.1
Annotated Gene NameGRAS family transcription factor
Annotated Gene Symbol(s)PAT1
Annotation TypeOrtholog
Chromosome Positionchr5:19522497-19524053 | Reverse length=490
E-Value7.7E-215
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7793984880812
Replicate 23.8738561653686
Replicate 35.5364993082952
Condition 2: 8 Hour
Replicate 15.1501634759888
Replicate 26.2296921734668
Replicate 36.5305610165599
Condition 3: 24 Hour
Replicate 17.5820064460499
Replicate 26.1445462960833
Replicate 37.5920451681489


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98411.p1 GENE.R_Transcript_98411~~R_Transcript_98411.p1 ORF type:complete len:542 (+),score=89.10,GRAS|PF03514.10|1.1e-134 R_Transcript_98411:293-1918(+)
ATGCATAAACCAACAAATTCTAGAGGGTCTTTCAGGAGCTTTGGTCAGACTTCACAGGAGGCCAAATCTTACTGGTGGTCAGAGTTCCAAAAGCAAGACGATCGACCATTCGTAAATGACTATTTGCAAGGCCAAGGGATATACTGCACACTTGAATCTTCATCTGTAAGTGGCAGTGATAACCTGTATGATTCTCCATCAACCATTAGTATTTCTTGGGACGGAAGCCCAAGTTCACAGCTAGAACCCGAATGCTCTTCATCAGGCTTTCAAATCGACTCCAACGAACTCTTGAACGACTCACCATTTGACGACTCTTGCAGAGCCCACGACATAGATGACTTGAGGCACAAGCTTAGAGAGCTTGAGTCTGTTATGTTGGGACCCAATTCAGATTTCTTCGACACCCCCGAAACTTGCCCAGGAGGGGTTGAGTACAACAATACCGCTACCACATCACTACAGAACGAGAACACAAGTCAGTTGGTTGAGATGATATCGAAGGGGAGCCTTAAAGAGGTGCTTCTTGCTTGTGCGAAAGCAATATCAGATGATGATTTGCTGACAGCAGAGTGGTTGATGTTGGAGCTACGACACATGGTTTCAGTTTCAGGAGAACCAATTCAAAGGTTGGGAGCCTATATGATAGAAGGGTTAGTAGCAAGGTTATCGTCTTCAGGAAGTTCCATCTATAATGCCTTAAGGTGCAAAGAGCCTACTAGTGGTGAACTCCTCTCTTACATGCATTTGCTCTATGAAGTCTGCCCATATTTCAAGTTTGGGTACATGTCTGCAAATGGAGCAATTGCTGATGCTATGAAAAACGAGACCAGAATCCATATAATCGATTTTCAGATAGCTCAAGGAAGCCAGTGGGTTAGCCTTATACAGGCTCTTGCTGCTCGGCCTAATGGCCCTCCACATGTACGAATAACTGGGATCGACGATTCCACATCAGAATATGCTCGAGGAGGAGGGCTTGAGTTCGTTGGGAAGAGACTGTCCAAGCTTGCAGAGGCTTGTAATTTGCCATTCGAGTTCTGTTCTGCAGGTCTTTGTGATTCTGATGTTCAGCTCCAAAATCTTATACTGCAGTCTGACGAAGCACTTGCTGTGAATTTCCCATTCATGCTGCACCATATGCCAGATGAGAGTGTCGGGCCTGAAAATCACAGAGATCGGTTGTTGAGGCTGGTTAAGAGCTTGTCGCCTAAGGTTGTTACCCTCGTTGAACAAGAATCTAATACAAACACAGCTCCATTCTTCCAACGGTTTCATGAAACCCTCGACTACTACTCTGCCATTTTTGAGTCTATTGATGTGACCCTGCCTCGAGACCACAAGGAGAGGATCAACATCGAGCAGCACTGTTTAGCAAGAGAAGTTGTCAACATAATAGCATGTGAAGGTGCTGAGAGAGTAGAGCGCCATGAGGTATTCGGAAAGTGGAGGTCTCGGTTCTTAATGGCTGGGTTTCGGCCATATCCTTTGAGCCCTCTAGTGAATGCCACTATCAGGACTCTGATGGAGAACTATAGCAGGAGTTACAGACTCGAAGAGAGAGACGGAGCTCTTTACCTTGGCTGGATGAACCGCGCTTTGGTTGCATCTTGTGCTTGGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98411.p1 GENE.R_Transcript_98411~~R_Transcript_98411.p1 ORF type:complete len:542 (+),score=89.10,GRAS|PF03514.10|1.1e-134 R_Transcript_98411:293-1918(+)
MHKPTNSRGSFRSFGQTSQEAKSYWWSEFQKQDDRPFVNDYLQGQGIYCTLESSSVSGSDNLYDSPSTISISWDGSPSSQLEPECSSSGFQIDSNELLNDSPFDDSCRAHDIDDLRHKLRELESVMLGPNSDFFDTPETCPGGVEYNNTATTSLQNENTSQLVEMISKGSLKEVLLACAKAISDDDLLTAEWLMLELRHMVSVSGEPIQRLGAYMIEGLVARLSSSGSSIYNALRCKEPTSGELLSYMHLLYEVCPYFKFGYMSANGAIADAMKNETRIHIIDFQIAQGSQWVSLIQALAARPNGPPHVRITGIDDSTSEYARGGGLEFVGKRLSKLAEACNLPFEFCSAGLCDSDVQLQNLILQSDEALAVNFPFMLHHMPDESVGPENHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFFQRFHETLDYYSAIFESIDVTLPRDHKERINIEQHCLAREVVNIIACEGAERVERHEVFGKWRSRFLMAGFRPYPLSPLVNATIRTLMENYSRSYRLEERDGALYLGWMNRALVASCAWQ*

Click here to download the sequence:
Link to NCBI Protein BLAST