Transcript Information: R_Transcript_98499.p1


Annotated TAIR IDAT1G75780.1
Annotated Gene Nametubulin beta-1 chain
Annotated Gene Symbol(s)TUB1
Annotation TypeOrtholog
Chromosome Positionchr1:28451378-28453602 | Reverse length=447
E-Value6.5E-242
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.690819304394
Replicate 228.180875190017
Replicate 336.894037544245
Condition 2: 8 Hour
Replicate 118.635260048346
Replicate 29.7622728982167
Replicate 313.118420654852
Condition 3: 24 Hour
Replicate 131.761686105585
Replicate 245.802071560373
Replicate 320.338132673666


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98499.p1 GENE.R_Transcript_98499~~R_Transcript_98499.p1 ORF type:3prime_partial len:339 (+),score=51.99,Tubulin|PF00091.21|5.8e-69,Tubulin_C|PF03953.13|9.8e-22 R_Transcript_98499:248-1261(+)
ATGAGAGAGATCCTTCACATACAGGGGGGCCAATGTGGGAACCAAATCGGATCCAAATTCTGGGAAGTCATCTGTACCGAACATGGCGTCGACAAAATGGGTCAATTCCAAGGCCCTTCTGATGGCACCTCCGATCTCCAACTTGAACGCATTAATGTCTACTTCAATGAAGCTGCTGGTGGCCGTTATGTTCCGAGGGCCGTCTTGATGGATCTTGAGCCCGGTACCATGGACAGTATCCGATCTGGCCCATTGGGTCACATCTTCAGGCCCGACAACTTCGTCTTTGGCCAGTCTGGGGCTGGTAATAATTGGGCTAAAGGTCATTATACTGAGGGTGCTGAACTTATCGATTCTGTTCTTGATGTTGTTCGCAAGGAGGCTGAGAATTGTGATTGCCTTCAAGGTTTCCAAGTATGTCACTCGCTTGGTGGCGGTACAGGTTCCGGTATGGGAACTCTCTTGATCTCCAAGATCAGAGAGGAGTATCCTGACAGGATGATGCTTACCTTCTCTGTTTTCCCATCACCCAAAGTGTCTGACACTGTTGTTGAGCCCTACAATGCTACACTCTCAGTCCACCAGTTGGTTGAGAATGCTGATGAGTGCATGGTTTTGGACAATGAAGCTCTCTATGACATTTGCTTCAGGACTTTGAAGCTCAGCAACCCCAGCTTTGGTGACCTCAACCACCTGATTTCTGCAACAATGAGTGGGGTGACATGCTGCCTTCGATTCCCCGGACAGCTGAACTCAGATCTAAGGAAGCTGGCAGTGAACCTCATCCCATTCCCTCGTCTTCACTTCTTCATGGTTGGCTTTGCCCCCCTGACCTCTCGCGGCTCCCAACAGTATGTTTCCCTAACAGTCCCCGAGCTGACCCAACAAATGTGGGATGCCAAGAACATGATGTGCGCAGCTGATCCTCGCCATGGGCGTTACCTAACCGCGTCAGCCATGTTCAGGGGCAAGATGAGCACCAAGGAAGTCGATGAGCAAATGATCAACGTGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98499.p1 GENE.R_Transcript_98499~~R_Transcript_98499.p1 ORF type:3prime_partial len:339 (+),score=51.99,Tubulin|PF00091.21|5.8e-69,Tubulin_C|PF03953.13|9.8e-22 R_Transcript_98499:248-1261(+)
MREILHIQGGQCGNQIGSKFWEVICTEHGVDKMGQFQGPSDGTSDLQLERINVYFNEAAGGRYVPRAVLMDLEPGTMDSIRSGPLGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQ

Click here to download the sequence:
Link to NCBI Protein BLAST