Transcript Information: R_Transcript_98514.p1


Annotated TAIR IDAT3G13980.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4619189-4620262 | Reverse length=357
E-Value3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.406864484486
Replicate 24.9844158551296
Replicate 34.5717228395682
Condition 2: 8 Hour
Replicate 14.1667123124514
Replicate 25.0734773925379
Replicate 35.5293771847817
Condition 3: 24 Hour
Replicate 16.7040655559892
Replicate 25.3748109901407
Replicate 38.2768631168939


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98514.p1 GENE.R_Transcript_98514~~R_Transcript_98514.p1 ORF type:5prime_partial len:476 (+),score=64.42 R_Transcript_98514:3-1430(+)
AACTGGCACCGGCACCTTCAAAAACCTCCTCAAACATGCACGCGCATGCCCCTCTCCTTTTTTTTTTACTCTCTCTCTCTTTCTCTGTTTTTCCTGTCCTTTGATCTCCCAAAGCGTGTCCTATTTTCCCCCTCCCTCATCTTTCTCTTTCCCCTTCTCATAATTTTGTTTCTTCTCCACTATTCCCCTCGTCTTTTCTCTCTTTCATCTACAGAAACCAAAAAAAACTTGTCACAAATGTACAAGTGGGAGAAACCCAAAGACATCTACAAACATGTCCACCATCACCAAGATTATGATCCTAAATACCCAACATTCTCATCTTCACTCCTTGACCAAATCAACAAATCCCTCAAAACCCACCAAGAAGAGGAGCTCAGCTTCTTCAGAGAACCCCAAGGCCAAAACATCACCAACCAAGAGAAAAAAATGTCCAGTCTAAGAAGGGCCTGTTTGGTTGAGAAGTGGATGGAGAAGAAGGTCAACGAGAAGATCATCTCCCGAAACTCAAAACCCCAAACAACCCCCACCACCCGAACCACATTGCTCGACGAGTTCGACATCCAGGACACCCTGTTCTTCAGCTCCACCACCACCACCAAAACAGAGTATTCTGTTTTCCTCCAGAAATCCTCAGGCCGGGGGCGGGCTCAGGCCCATCCTCCTCCGAGGCCCGAACGGGTCGCGACCCGGCCCGCCATCGAGTCGACATACCTGCAGAAGGCAAGAGTGCAGTCGTCGAACAAGTCAAGGGCAAACAAGATATACTCGAACCTGCTAAAACAGCCCATCTCGCCGGGGGCCCACTTATCGGGTTTTATAAGCTCGTTGTTCAAAGAAGGCAAGAGTGGGAGCAGAAGTAAGAAGAAAGAGTGTACAAGTAGCAGGTCAGAGCAAGCATCTACTTGTTCTTCAGCTTCTTCATTTTCAAGGTCTTGTTTGAGCAAAAACAGCTCACCCAAAAACAGTAATGGTGGTAACTGTAATAATAAAAGGACGGTTAGATTTTGTCTTGATGAGGATTCACGCCATTGTGGAGAGAAATCAAAGTTTTCAAGGTCAATATCAAAGAGGTATCAAGAGTTAAGGAAATTGAATAGGTTAGAGAGGGAAAATAATCAAAAAGATCTTGAAGAAATTGCACTGGATTTGTTGAGCGGTTATTGGGATTCCAAATTGAATAGTAGTACTAGTAATAGTAAGATAGCCAATCATAGCGATACACATGTTAAAGAGAAGATGATTAATGATGGTGATTATGCTGCCAATCACGGCGGTAATTACGATGGTGATGATGGTGATTATGATGATGATGATGATGGGTTGAGTTGTTCAAGTTCAGATTTGTTTGAGTTAGATCATCTCTCATTAATTGGGAATGAGCTCCCTGTTTATGAGACTACTCAATTTGATTCCAGTTATCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98514.p1 GENE.R_Transcript_98514~~R_Transcript_98514.p1 ORF type:5prime_partial len:476 (+),score=64.42 R_Transcript_98514:3-1430(+)
NWHRHLQKPPQTCTRMPLSFFFYSLSLSLFFLSFDLPKRVLFSPSLIFLFPLLIILFLLHYSPRLFSLSSTETKKNLSQMYKWEKPKDIYKHVHHHQDYDPKYPTFSSSLLDQINKSLKTHQEEELSFFREPQGQNITNQEKKMSSLRRACLVEKWMEKKVNEKIISRNSKPQTTPTTRTTLLDEFDIQDTLFFSSTTTTKTEYSVFLQKSSGRGRAQAHPPPRPERVATRPAIESTYLQKARVQSSNKSRANKIYSNLLKQPISPGAHLSGFISSLFKEGKSGSRSKKKECTSSRSEQASTCSSASSFSRSCLSKNSSPKNSNGGNCNNKRTVRFCLDEDSRHCGEKSKFSRSISKRYQELRKLNRLERENNQKDLEEIALDLLSGYWDSKLNSSTSNSKIANHSDTHVKEKMINDGDYAANHGGNYDGDDGDYDDDDDGLSCSSSDLFELDHLSLIGNELPVYETTQFDSSYL*

Click here to download the sequence:
Link to NCBI Protein BLAST