Transcript Information: R_Transcript_98520.p1


Annotated TAIR IDAT1G48050.1
Annotated Gene NameKu80 family protein
Annotated Gene Symbol(s)KU80, ATKU80
Annotation TypeOrtholog
Chromosome Positionchr1:17723498-17726859 | Forward length=680
E-Value3.1E-260
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2879756071374
Replicate 21.2281958460787
Replicate 32.6798968775443
Condition 2: 8 Hour
Replicate 12.2166869381211
Replicate 21.7440242104546
Replicate 33.3876264946126
Condition 3: 24 Hour
Replicate 13.0375928783174
Replicate 22.4881280921125
Replicate 34.4507031814582


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98520.p1 GENE.R_Transcript_98520~~R_Transcript_98520.p1 ORF type:complete len:718 (+),score=188.06,Ku|PF02735.12|2e-44,Ku_PK_bind|PF08785.7|4e+03,Ku_PK_bind|PF08785.7|7.1e+03,Ku_PK_bind|PF08785.7|1.2e-33,Ku_N|PF03731.11|1.6e-11,Ku_N|PF03731.11|5.7e+02,Ku_C|PF03730.10|1.3e-07 R_Transcript_98520:170-2323(+)
ATGTTAGTCCGAAAATGCATGGTGTCCTTCCACAGATTGAGAAAGTCTGCCATGCTTCTTGAAAAGAAGCTTATTTATAACAAATATGATGAAGTGGGAATTGTGTTATTTGGAACAGAAGAAACGGACAATGCACTGGCAGTGGAAATTGGTGGCTACCAAAATATCATGGTTCTGAGGCATATAAAAGTTGTTGACGGAGATTTAGTTGATGTTATGGAGAAACTTCCTCGAGGAACGGTTCCTGGTGACTTTCTTGATGCCATTGTTGTTGGGATGGATATGCTAATAAAGAAGTATGGATCAGAAACCAAGGGAAATAAACGCCTTTGTCTAATTACAAATGCTCTTTCCCAACTAAAAGATCCATTTGAGGGAACAAAAGAAGATCAAGTTAGCACCATTGCTGCTGAAATGACTGACCAGGCAATGAATTTGGAATGCATAGTAGTGAGAGGGAAGCTAAGCAGTGATGCTGATAAGAATGTTATGGATGAGAATGACCATCTGTTGGACCTCTTCACGAAGAGAACCTGCGGAAAGACTGTTTATGTTGAAAGCGCGACTTCTCTGTTAGGAGCACTGAGGACACGGAGTATATCACCTGTTACAATATTCAGGGGTGATCTTGAAGTCAGTCCTACACTGAAGATCAAGGTTTGGGTGTACAAGAAAACTTCTGAAGAGAGATTTCCTGTTCTGAAGAAGTATTCAGACAAAGCACCTGCCACTGATAGATTTGCCACACATGAAATCAAGGTAGATTATGAATTTCAAAGTATCCAAGACCCAAACAAAGTTGTACCTCCAGAACAAAGAATCAAAGGTTATCAGTATGGACCTGAAGTGGTCCCTGTCTCATCTGATGCATGGGAAGCTTTCAAGTTCAAGACTGAGAAGGGTGTGAAGCTTCTTGGATTCACAGATGCTAAAAACATATTACGTCAATATTACATGAAAGATGTCAACGTGTTCATTGCTGAACCAGGCAAGACAGAAGCCGTTTTAGCAATTTCTGCTTTGGCTAGAGCAATGAAGGAAATGAATAAGGTAGCCATAGTGCGGTGTGTTTGGCGGCAAGGACAGACAGGTGTTGTGGTGGGGGTCTTGACACCAAATGTTTCTCATAACGACAACACTCCGGATTCATTATACTTCAATGTACTCCCATTTGCTGAGGATGTGCGGGAGTTCCAATTTCCTTCTTTCAAAAGTCTCCCTGAAGCATTTCAGCCCACTGAGGAACAGCAGCAGGCAGCAGATAACTTGGTAAAGATGCTTGACCTTGCACCACCTGCCAAGGAGGAAAATCTAAAGCCTGAGCTTACACCAAACCCTGTTCTGGAGAGGTTTTATCACTTTCTCGAGCTAAAAGTGAAAAGCCCAGATGCAGCTGTGCCTTCACTTGATGAAGCCTTGAAGAGGATAACTGAACCTGATCCAGAACTTCTTTCACAAAACAAGTCTGTGATTGATGAGTTTCGAAGATGCTTTGAACTAAAAGAGAATCCAAAGATGAAATCAGGCCGGTCATTCAGGGAGAAACCATCTGGATCTGACGATGAGAAAGAGCCTATGGAAGTTGAACATCCTCTTGAGAAAAAACCTTTGAAGAGCACTGAAATTTCTAATGAGGTTGAGAAAGAGGCTGTACAACATCACTGTGAGGAAAAACCTTCAAAGAGCAGTAATTCTTTAATTGGTGCAAAAGGGGATGAGAACCCTTCCAGTAAAGCAAATAATTATACTGACACTATGGTTGAGAAGATCGGAGATCTGACTCCAGTTCAGGATTTTGAAGCTATGCTATCACGTAGAGATAACCCAGATTGGATTTCTAAAGCAATCAAGGGGATGAAGAACAAAATTTACAATGTTGTGGAGGAGTCATATGAAGGGAACACCTATGATAAAGCAGTGGAATATCTTCATGCTCTTCGGAAAGGCTGTGTCCTTGAACAGGAACCAAAACAGTTCAACGATTTCTTGCAATATCTCTGTAGATTCTGTCGGGAACATGACTTTAATGATTTTTGTGAACTTCTTGCCGCCAAAGGGATGACATTAATCACTAAATCAGAAGCCATTGACAGTAATGTGGCAGATGAAGAAAAGAGAAGTTTTCTGACTACAAAAGAGCCCAAAGTCGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98520.p1 GENE.R_Transcript_98520~~R_Transcript_98520.p1 ORF type:complete len:718 (+),score=188.06,Ku|PF02735.12|2e-44,Ku_PK_bind|PF08785.7|4e+03,Ku_PK_bind|PF08785.7|7.1e+03,Ku_PK_bind|PF08785.7|1.2e-33,Ku_N|PF03731.11|1.6e-11,Ku_N|PF03731.11|5.7e+02,Ku_C|PF03730.10|1.3e-07 R_Transcript_98520:170-2323(+)
MLVRKCMVSFHRLRKSAMLLEKKLIYNKYDEVGIVLFGTEETDNALAVEIGGYQNIMVLRHIKVVDGDLVDVMEKLPRGTVPGDFLDAIVVGMDMLIKKYGSETKGNKRLCLITNALSQLKDPFEGTKEDQVSTIAAEMTDQAMNLECIVVRGKLSSDADKNVMDENDHLLDLFTKRTCGKTVYVESATSLLGALRTRSISPVTIFRGDLEVSPTLKIKVWVYKKTSEERFPVLKKYSDKAPATDRFATHEIKVDYEFQSIQDPNKVVPPEQRIKGYQYGPEVVPVSSDAWEAFKFKTEKGVKLLGFTDAKNILRQYYMKDVNVFIAEPGKTEAVLAISALARAMKEMNKVAIVRCVWRQGQTGVVVGVLTPNVSHNDNTPDSLYFNVLPFAEDVREFQFPSFKSLPEAFQPTEEQQQAADNLVKMLDLAPPAKEENLKPELTPNPVLERFYHFLELKVKSPDAAVPSLDEALKRITEPDPELLSQNKSVIDEFRRCFELKENPKMKSGRSFREKPSGSDDEKEPMEVEHPLEKKPLKSTEISNEVEKEAVQHHCEEKPSKSSNSLIGAKGDENPSSKANNYTDTMVEKIGDLTPVQDFEAMLSRRDNPDWISKAIKGMKNKIYNVVEESYEGNTYDKAVEYLHALRKGCVLEQEPKQFNDFLQYLCRFCREHDFNDFCELLAAKGMTLITKSEAIDSNVADEEKRSFLTTKEPKVE*

Click here to download the sequence:
Link to NCBI Protein BLAST