Transcript Information: R_Transcript_98521.p1


Annotated TAIR IDAT1G48050.1
Annotated Gene NameKu80 family protein
Annotated Gene Symbol(s)KU80, ATKU80
Annotation TypeHomolog
Chromosome Positionchr1:17723498-17726859 | Forward length=680
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8997623801752
Replicate 23.9329353287166
Replicate 35.5746485300371
Condition 2: 8 Hour
Replicate 14.4421259417569
Replicate 25.3098849209895
Replicate 34.2567936410642
Condition 3: 24 Hour
Replicate 15.7563823432296
Replicate 23.8059960032412
Replicate 35.9723088009971


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98521.p1 GENE.R_Transcript_98521~~R_Transcript_98521.p1 ORF type:complete len:678 (+),score=167.16,Ku|PF02735.12|1.8e-44,Ku_PK_bind|PF08785.7|6.6e+03,Ku_PK_bind|PF08785.7|1.5e-33,Ku_C|PF03730.10|1.3e-07 R_Transcript_98521:1003-3036(+)
ATGTTGCCTTTTTATGCTGTACTTGCTATAAGCCATAGTTCTATTTTCTGTAATTTTCATGTAACACTGACTGTCATTTGGCTTTTATTATGTCCTTTTGCTTTGAGAGTTGAGACCTTAACATCACTCTTAGTTCTTGATGCCATTGTTGTTGGGATGGATATGCTAATAAAGAAGTATGGATCAGAAACCAAGGGAAATAAACGCCTTTGTCTAATTACAAATGCTCTTTCCCAACTAAAAGATCCATTTGAGGGAACAAAAGAAGATCAAGTTAGCACCATTGCTGCTGAAATGACTGACCAGGCAATGAATTTGGAATGCATAGTAGTGAGAGGGAAGCTAAGCAGTGATGCTGATAAGAATGTTATGGATGAGAATGACCATCTGTTGGACCTCTTCACGAAGAGAACCTGCGGAAAGACTGTTTATGTTGAAAGCGCGACTTCTCTGTTAGGAGCACTGAGGACACGGAGTATATCACCTGTTACAATATTCAGGGGTGATCTTGAAGTCAGTCCTACACTGAAGATCAAGGTTTGGGTGTACAAGAAAACTTCTGAAGAGAGATTTCCTGTTCTGAAGAAGTATTCAGACAAAGCACCTGCCACTGATAGATTTGCCACACATGAAATCAAGGTAGATTATGAATTTCAAAGTATCCAAGACCCAAACAAAGTTGTACCTCCAGAACAAAGAATCAAAGGTTATCAGTATGGACCTGAAGTGGTCCCTGTCTCATCTGATGCATGGGAAGCTTTCAAGTTCAAGACTGAGAAGGGTGTGAAGCTTCTTGGATTCACAGATGCTAAAAACATATTACGTCAATATTACATGAAAGATGTCAACGTGTTCATTGCTGAACCAGGCAAGACAGAAGCCGTTTTAGCAATTTCTGCTTTGGCTAGAGCAATGAAGGAAATGAATAAGGTAGCCATAGTGCGGTGTGTTTGGCGGCAAGGACAGACAGGTGTTGTGGTGGGGGTCTTGACACCAAATGTTTCTCATAACGACAACACTCCGGATTCATTATACTTCAATGTACTCCCATTTGCTGAGGATGTGCGGGAGTTCCAATTTCCTTCTTTCAAAAGTCTCCCTGAAGCATTTCAGCCCACTGAGGAACAGCAGCAGGCAGCAGATAACTTGGTAAAGATGCTTGACCTTGCACCACCTGCCAAGGAGGAAAATCTAAAGCCTGAGCTTACACCAAACCCTGTTCTGGAGAGGTTTTATCACTTTCTCGAGCTAAAAGTGAAAAGCCCAGATGCAGCTGTGCCTTCACTTGATGAAGCCTTGAAGAGGATAACTGAACCTGATCCAGAACTTCTTTCACAAAACAAGTCTGTGATTGATGAGTTTCGAAGATGCTTTGAACTAAAAGAGAATCCAAAGATGAAATCAGGCCGGTCATTCAGGGAGAAACCATCTGGATCTGACGATGAGAAAGAGCCTATGGAAGTTGAACATCCTCTTGAGAAAAAACCTTTGAAGAGCACTGAAATTTCTAATGAGGTTGAGAAAGAGGCTGTACAACATCACTGTGAGGAAAAACCTTCAAAGAGCAGTAATTCTTTAATTGGTGCAAAAGGGGATGAGAACCCTTCCAGTAAAGCAAATAATTATACTGACACTATGGTTGAGAAGATCGGAGATCTGACTCCAGTTCAGGATTTTGAAGCTATGCTATCACGTAGAGATAACCCAGATTGGATTTCTAAAGCAATCAAGGGGATGAAGAACAAAATTTGCAATCTTGTGGAGGAGTCGTATGAAGGGAACACCTACGATGAAGCAGTGGAATATCTTTATGCTCTTCGGAAAGGCTGTGTCCTTGAACAGGAACCAAAACAGTTCAACGATTTCTTGCAATATCTCTGTAGATTCTGTCGGGAACATGACTTTAATGATTTTTGTGAACTTCTTGCCGCCAAAGGGATGACATTAATCACTAAATCAGAAGCCATTGACAGTAATGTGGCAGATGAAGAAAAGAGAAGTTTTCTGACTACAAAAGAGCCCAAAGTCGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98521.p1 GENE.R_Transcript_98521~~R_Transcript_98521.p1 ORF type:complete len:678 (+),score=167.16,Ku|PF02735.12|1.8e-44,Ku_PK_bind|PF08785.7|6.6e+03,Ku_PK_bind|PF08785.7|1.5e-33,Ku_C|PF03730.10|1.3e-07 R_Transcript_98521:1003-3036(+)
MLPFYAVLAISHSSIFCNFHVTLTVIWLLLCPFALRVETLTSLLVLDAIVVGMDMLIKKYGSETKGNKRLCLITNALSQLKDPFEGTKEDQVSTIAAEMTDQAMNLECIVVRGKLSSDADKNVMDENDHLLDLFTKRTCGKTVYVESATSLLGALRTRSISPVTIFRGDLEVSPTLKIKVWVYKKTSEERFPVLKKYSDKAPATDRFATHEIKVDYEFQSIQDPNKVVPPEQRIKGYQYGPEVVPVSSDAWEAFKFKTEKGVKLLGFTDAKNILRQYYMKDVNVFIAEPGKTEAVLAISALARAMKEMNKVAIVRCVWRQGQTGVVVGVLTPNVSHNDNTPDSLYFNVLPFAEDVREFQFPSFKSLPEAFQPTEEQQQAADNLVKMLDLAPPAKEENLKPELTPNPVLERFYHFLELKVKSPDAAVPSLDEALKRITEPDPELLSQNKSVIDEFRRCFELKENPKMKSGRSFREKPSGSDDEKEPMEVEHPLEKKPLKSTEISNEVEKEAVQHHCEEKPSKSSNSLIGAKGDENPSSKANNYTDTMVEKIGDLTPVQDFEAMLSRRDNPDWISKAIKGMKNKICNLVEESYEGNTYDEAVEYLYALRKGCVLEQEPKQFNDFLQYLCRFCREHDFNDFCELLAAKGMTLITKSEAIDSNVADEEKRSFLTTKEPKVE*

Click here to download the sequence:
Link to NCBI Protein BLAST