Transcript Information: R_Transcript_98659.p1


Annotated TAIR IDAT5G03340.1
Annotated Gene NameATPase, AAA-type, CDC48 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:810091-813133 | Reverse length=810
E-Value4.5E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5766924967956
Replicate 210.118698995806
Replicate 38.5555284997678
Condition 2: 8 Hour
Replicate 14.4251563157672
Replicate 23.7717150093566
Replicate 37.4355995312429
Condition 3: 24 Hour
Replicate 13.59580113205
Replicate 25.3145202145969
Replicate 35.5378529930704


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98659.p1 GENE.R_Transcript_98659~~R_Transcript_98659.p1 ORF type:complete len:83 (+),score=6.48,CDC48_N|PF02359.14|2.2e-06 R_Transcript_98659:137-385(+)
ATGTTGTCTTGCAAGGTAAAGAAGAGAAGAGATACAATATGCTTTCCCCTTGCTCATGATACATGTGAAGAACCAAGGATTAGGATGAACAAAGTTGTGAGATATAATTCGAGTGTCAGAGTCGGAGATGTAATTTCTTTGCACAAGTGTCTTGATCGATGTCGAATATGTGGCAAAAGGGAAAAGCGGAAGAGTGACTCTAGTATTGAGCTTTGTAGAGGAACATACTTATATACACGGCTAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98659.p1 GENE.R_Transcript_98659~~R_Transcript_98659.p1 ORF type:complete len:83 (+),score=6.48,CDC48_N|PF02359.14|2.2e-06 R_Transcript_98659:137-385(+)
MLSCKVKKRRDTICFPLAHDTCEEPRIRMNKVVRYNSSVRVGDVISLHKCLDRCRICGKREKRKSDSSIELCRGTYLYTRLN*

Click here to download the sequence:
Link to NCBI Protein BLAST