Transcript Information: R_Transcript_98820.p1


Annotated TAIR IDAT3G05670.1
Annotated Gene NameRING/U-box protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1653888-1657022 | Forward length=883
E-Value2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6899100354322
Replicate 20.63146768169318
Replicate 31.4467413218623
Condition 2: 8 Hour
Replicate 11.3255505836103
Replicate 21.748520083822
Replicate 32.6203828865521
Condition 3: 24 Hour
Replicate 12.4166112871267
Replicate 21.3597979165619
Replicate 32.3697965976791


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98820.p1 GENE.R_Transcript_98820~~R_Transcript_98820.p1 ORF type:complete len:665 (+),score=102.60,PHD|PF00628.25|1.6e+04,PHD|PF00628.25|4.5e-09,zf-RING_2|PF13639.2|8.1e-08,zf-RING_2|PF13639.2|1.6e+04 R_Transcript_98820:109-2103(+)
ATGGAAGAAACCCTAGACCCGGATTCTTCCCCAAATAAACGCCTGAAATCCGAAACCGTAACCCTAGAAACTCCAATTTCACCTCCATCAGCCAAAGGCAAATCCCCAATTTGCGACGATATCATCTCCGGCGACGACGATCCGGCTGATTTACCCCCTCAAAATTGTGGAATTTGCTTCTCGGAAGAAGGGAAATCGATTCGAGGTCTTGTCGATAGTTGCGACCATTACTTTTGCTTTCTTTGCATCATCGAATGGTCCAAGATTGAGTCTCGATGTCCCTTATGTAGGGCTCGGTTTAGCTCTATTCGTCGTGTGAGGAAAGATGGGAGCTTTATTGGGAATGGCTCTGTTAGGGTTCCTGTTCGTGATCAGATTTATGATCCTTTTGGGGATCCTGTTGATCCTTACGCACAAGCGAAGTGCAATGTTTGCAGTGGTACACATGAAGAGAACCTCCTCCTACTATGTGATCTTTGTGACTCGGCCTGGCATACTTTCTGTGTTGGCCTTGGCGCCACTGTACCTGATGGCGACTGGTATTGTAACGATTGTGCACTTCTACGAGCTGAACAGTGCGATGCTCAAATGGATGATAGTGCAGATAATTCAAGTCATTTGAAACTTGTAGATGATGTTGCACCATCAACATCACCATCACCATCACCATCACCGTTGTCAGTGCCACCACGCCGGCCATCAGTTTCAGTCTCGATATTTGATATTGTAAGGGATCCAAGTGAGAGGGAAGCTGAGCCCGAGTCCGGCACTGATAGGCTTCGGAATTTAGTATCTCCGTGTAAGAAGAAATTGTCTTCCTCAGTTAATAGTGGATGTGGTGGAAGCTTACAAGGTAAAAGTGGCAAATCTCAAATTTACGCAACAGAATATAGTGCAAGAACGTTGCACAAGTGCCGAAATATTCATAGGCATATAAGTGTCTTACGTGAGAATTGGGACGCCTTCAGAACTGGATCCTTGAGCTTCTCCTCGAAGCCGTTGGATTCTAGTAGGGAAGGTAGTCGAAAGGGGAATGTGGTTGCAATGTGTGCAGAAAGATTTGGAAAATCACAATCAGTGTCATCCACAAGCTCATTGCAATTGAAGGCACAAGAGGCTTCATGCAATGCCGGTTCTAATAAACACCTTTATAATCTTAACAGAGCTTGGAAATTGATGGATAAGTCAATGCATCAGTTTGTTAAACCAAAAGATGCCCCTAAGACTACATGCAATAAAGGGCATGGCATAAAGGCTGGTAATATTTCTTCCAAGTGTGTCCTGCTTAGAAGAAAGGATCTGGTGTCTGCTTCATCAAGAGCACAAAATCGTAATGCGATAAATGAGTGGCTTCCTCAGAGGTCCGGACAACAGTTGACTAGCATTGTCACTGAAGCTGCTGGCACCTCTGGCAGCAAATGTCACAAATCTTTTGTGTCTAGATTACATTCATTCGGAAAGGTTCAAACTCCAATACAAGCTGATATTTGTCATCTCAAAGCAAACTTTCCATCACGAGGAAAGCTGCACACAGGCAAACCCACTTTTCCCAATAATGGGGCTGCATGTTCATCCTTATCATCCGGGCCAGTAGCTGGATCTTTCAATTTATCTTGCACTAAATCCCAAATTAAGGAAATATCTCCGTGTCATGTGAGACAAGTTGTGAATGCAAGTAATTGTATTGCTATCCAGGTTGATGTACAGACCTCAGCTCGAGCTGAAACTTGTAATGATAGGGCTGTTTTACCTTCTCAGCAGAACCGGGGTGAAGGATTATCAAATGTCTCTGGTGAACACAAGGTTTCAGCCTGCTCAACATCTCGATACGATCCTGTAATAGGTGCATCCAGTGCATTGTGTGTCAATTTACAAGGAGAAAAGACGTCTGGGTGTCCCAGTGAAGTTGGGGCTAACACTGCTACCAAATCAAGTATAAATGACGAAGCAAAGGATGAGATCATATCCCTTGTCAAGCTAACCTTAAGCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98820.p1 GENE.R_Transcript_98820~~R_Transcript_98820.p1 ORF type:complete len:665 (+),score=102.60,PHD|PF00628.25|1.6e+04,PHD|PF00628.25|4.5e-09,zf-RING_2|PF13639.2|8.1e-08,zf-RING_2|PF13639.2|1.6e+04 R_Transcript_98820:109-2103(+)
MEETLDPDSSPNKRLKSETVTLETPISPPSAKGKSPICDDIISGDDDPADLPPQNCGICFSEEGKSIRGLVDSCDHYFCFLCIIEWSKIESRCPLCRARFSSIRRVRKDGSFIGNGSVRVPVRDQIYDPFGDPVDPYAQAKCNVCSGTHEENLLLLCDLCDSAWHTFCVGLGATVPDGDWYCNDCALLRAEQCDAQMDDSADNSSHLKLVDDVAPSTSPSPSPSPLSVPPRRPSVSVSIFDIVRDPSEREAEPESGTDRLRNLVSPCKKKLSSSVNSGCGGSLQGKSGKSQIYATEYSARTLHKCRNIHRHISVLRENWDAFRTGSLSFSSKPLDSSREGSRKGNVVAMCAERFGKSQSVSSTSSLQLKAQEASCNAGSNKHLYNLNRAWKLMDKSMHQFVKPKDAPKTTCNKGHGIKAGNISSKCVLLRRKDLVSASSRAQNRNAINEWLPQRSGQQLTSIVTEAAGTSGSKCHKSFVSRLHSFGKVQTPIQADICHLKANFPSRGKLHTGKPTFPNNGAACSSLSSGPVAGSFNLSCTKSQIKEISPCHVRQVVNASNCIAIQVDVQTSARAETCNDRAVLPSQQNRGEGLSNVSGEHKVSACSTSRYDPVIGASSALCVNLQGEKTSGCPSEVGANTATKSSINDEAKDEIISLVKLTLSF*

Click here to download the sequence:
Link to NCBI Protein BLAST