Transcript Information: R_Transcript_98907.p1


Annotated TAIR IDAT5G48655.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19731575-19732486 | Reverse length=203
E-Value5.8E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.206335551215
Replicate 225.755461843992
Replicate 327.080854224785
Condition 2: 8 Hour
Replicate 131.886037464635
Replicate 239.156388646343
Replicate 339.368826589995
Condition 3: 24 Hour
Replicate 138.263012046174
Replicate 234.994344106383
Replicate 332.6856389991


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98907.p1 GENE.R_Transcript_98907~~R_Transcript_98907.p1 ORF type:complete len:225 (+),score=48.52,zf-RING_2|PF13639.2|3.7e-09,zf-C3HC4|PF00097.21|4.4e-08,zf-C3HC4_3|PF13920.2|8.8e-08,zf-C3HC4_2|PF13923.2|9.4e-08,zf-RING_5|PF14634.2|1.4e-07,zf-C3HC4_4|PF15227.2|1.2e-05 R_Transcript_98907:283-957(+)
ATGAGCGCCAGGGTTTCACGGGGTGCTCCTCGGAAGGGTTTTGGCCGGACTTCTCAGCGGAGGAAAATGGTATTAGACGTCGATCTCAATGTACCTCCATGTGAAAATCTTAATGAAGTTGGTACTTCTAGTCATGCTCCTGCTCTTGTAGAGTTGCAATTGGGTCAGCAACAAGCCCCTCCACAACCGGCACCCATTGATGTTGATTCACTTGATGATGACGTAATTGTATCTTCTCCGAGGGCCTTTGCAGAGGCCAAAAACAATTCAAGGAGGAATCGAGGGAGAAGAAATTTCGTTGATGTTGATTTAGATTCTGCAAGTAGGCCTGCTGCTAATAGCCGTCACAAACGTCAAAGAGTACCAGCAAATCAGCCTGTTATTAACTGCGAATCATATGTAAATCTGGAAAGCAGTGGTGCAAGTAAAAATCAGAAGTCTTTACCGCCGCAGCCAAAGAACATGCCTCCTCCTCCTCCGCCGGAACCTAAGTTTAGTTGCCCTGTTTGCATGGGTCCTTTGGTTGAAGAGATGTCCACAAAGTGTGGCCACATTTTCTGCAAGGCTTGCATTAAGCAGTCAATAGCTGCTCAGGGTAAATGCCCAACATGCAGGAGAAAGGTGACAATGAAGGATACTATTAGAATCTACCTTCCAGCAACAAATTTAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98907.p1 GENE.R_Transcript_98907~~R_Transcript_98907.p1 ORF type:complete len:225 (+),score=48.52,zf-RING_2|PF13639.2|3.7e-09,zf-C3HC4|PF00097.21|4.4e-08,zf-C3HC4_3|PF13920.2|8.8e-08,zf-C3HC4_2|PF13923.2|9.4e-08,zf-RING_5|PF14634.2|1.4e-07,zf-C3HC4_4|PF15227.2|1.2e-05 R_Transcript_98907:283-957(+)
MSARVSRGAPRKGFGRTSQRRKMVLDVDLNVPPCENLNEVGTSSHAPALVELQLGQQQAPPQPAPIDVDSLDDDVIVSSPRAFAEAKNNSRRNRGRRNFVDVDLDSASRPAANSRHKRQRVPANQPVINCESYVNLESSGASKNQKSLPPQPKNMPPPPPPEPKFSCPVCMGPLVEEMSTKCGHIFCKACIKQSIAAQGKCPTCRRKVTMKDTIRIYLPATNLT*

Click here to download the sequence:
Link to NCBI Protein BLAST