Transcript Information: R_Transcript_98952.p1


Annotated TAIR IDAT5G42630.1
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)KAN4, ATS
Annotation TypeOrtholog
Chromosome Positionchr5:17073997-17075747 | Reverse length=276
E-Value4.1E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0871669534158
Replicate 23.6858709194755
Replicate 33.5903977423436
Condition 2: 8 Hour
Replicate 12.9168114984179
Replicate 21.4019361655916
Replicate 33.015784836616
Condition 3: 24 Hour
Replicate 12.9506899571657
Replicate 22.4198559911292
Replicate 30.75474843747922


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98952.p1 GENE.R_Transcript_98952~~R_Transcript_98952.p1 ORF type:3prime_partial len:319 (+),score=64.07,Myb_DNA-binding|PF00249.27|7.8e-07,Myb_DNA-binding|PF00249.27|5.8e+03 R_Transcript_98952:334-1287(+)
ATGTTTTTGAGCTCAAACTCTTCAACAACAATGTCTAGCCCTTCAACACTTTTTCCTGATCTTTCTCTTCAAATCAGCCCACCTTCTATTTCTTCCACTACAGACTCAGCTAGTAGTGGTGGTGGTAGTAGTAGCTGCACTGATATTATAAGTGAACCTGTTTTGAGCTTAGGGTTTGACAATCATCATCGTCATCATCATGTTAATAATCAATTCAATGGGCCCCCTTTTCACCCTTCTAATATGGGTAGAAATTATAATAATAATAGTTATCATCACCATTATCATCATCATCATCAGTTTAATCAACATCAGCCGCAAATCTACGGCCGAGATTTCAAGAGGACTTCAAGGGCGGCTATTGGTGGAGTTAAGAGAAGTATTAGAGCTCCTAGGATGAGATGGACTTCCACTCTTCATGCTCACTTTGTTCATGCAGTTCAGTTACTTGGTGGCCATGAAAGAGCAACACCAAAATCTGTTCTTGAGCTGATGAATGTCAAGGATCTAACCCTAGCTCATGTTAAGAGCCATTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGCATCAGCATCATCATCATCAGGTCCAGCAGGGCATGGAGACATGATGATGATGGGCTCCAATAACCCAAGGACAGGGATTGTAGATCAAGAAAGGAGAGAGAGAGGATTTTCTTGTGAGAAAGCTGACTCTATTCCTTTCACCTTAGATAAAACAAATTTAGGTTCATGCCTATCAACCTTCGATGCCGACGATGATAGGACGCCATTGGGTCAATATTCTCAATCTAAAGGAACTGATTCATATTTGAAGATGGATGAGCAGGAGGACGAGCTGCTGAAATTGCGTATGGAGAAGGAAAGGATCGAAACAACCGGATGTTTCTCGTCTTCTGATAGTTTACTGAATTTAGAGTTCACCTTAGGACGCCCAAGTTGGCAAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98952.p1 GENE.R_Transcript_98952~~R_Transcript_98952.p1 ORF type:3prime_partial len:319 (+),score=64.07,Myb_DNA-binding|PF00249.27|7.8e-07,Myb_DNA-binding|PF00249.27|5.8e+03 R_Transcript_98952:334-1287(+)
MFLSSNSSTTMSSPSTLFPDLSLQISPPSISSTTDSASSGGGSSSCTDIISEPVLSLGFDNHHRHHHVNNQFNGPPFHPSNMGRNYNNNSYHHHYHHHHQFNQHQPQIYGRDFKRTSRAAIGGVKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKASASSSSGPAGHGDMMMMGSNNPRTGIVDQERRERGFSCEKADSIPFTLDKTNLGSCLSTFDADDDRTPLGQYSQSKGTDSYLKMDEQEDELLKLRMEKERIETTGCFSSSDSLLNLEFTLGRPSWQM

Click here to download the sequence:
Link to NCBI Protein BLAST