Transcript Information: R_Transcript_99008.p1


Annotated TAIR IDAT1G05600.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1672161-1673675 | Forward length=504
E-Value4.8E-208
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5854030446769
Replicate 22.457900247146
Replicate 33.7723397231759
Condition 2: 8 Hour
Replicate 13.8380621643499
Replicate 23.5049794949477
Replicate 35.1861744629677
Condition 3: 24 Hour
Replicate 14.2818132527861
Replicate 24.5073247335902
Replicate 35.2982142297648


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99008.p1 GENE.R_Transcript_99008~~R_Transcript_99008.p1 ORF type:complete len:504 (+),score=90.89,PPR_1|PF12854.3|23,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|1.2e+04,PPR_1|PF12854.3|0.045,PPR_1|PF12854.3|3.6e-07,PPR_1|PF12854.3|3e-08,PPR_1|PF12854.3|18,PPR_1|PF12854.3|3.7e-05,PPR_1|PF12854.3|1.7e-08,PPR_1|PF12854.3|4.6e-06,PPR_1|PF12854.3|0.18,PPR_2|PF13041.2|3.6e+03,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|0.83,PPR_2|PF13041.2|22,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|20,PPR_2|PF13041.2|0.00029,PPR_2|PF13041.2|3.4e-08,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|0.075,PPR|PF01535.16|9.4e+02,PPR|PF01535.16|0.016,PPR|PF01535.16|0.053,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.011,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|0.11,PPR|PF01535.16|1.5,PPR|PF01535.16|0.001,PPR|PF01535.16|0.14,PPR|PF01535.16|0.015,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|9.3,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|6.5,PPR_3|PF13812.2|0.99,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|6.7,TPR_19|PF14559.2|29,TPR_19|PF14559.2|3.8e+02,TPR_19|PF14559.2|1.4e+03,TPR_19|PF14559.2|2.3,TPR_19|PF14559.2|4.9e+02,TPR_19|PF14559.2|3.2e+02,TPR_19|PF14559.2|8.1e+02 R_Transcript_99008:516-2027(+)
ATGGTTATAAGGTGGCCTAGGCTTCTGAATCCCACCCAGCTATCACAGATCATAAGACAGCAGAAAAACCCCTTGACAGCATTAGAGATCTTCAATGAAGCCAAATCCAAATATCCTTCCTATCGTCACAATGGTGCTGTTTATGCCACCATGATCAACATCCTTGGGAGCTCAGGTCGATTATTTGAGATGAAACAAGTCATTGAACAGATGAAACATGACTCCTGCGAGTGCAAAGATCCAGTCTTTGCAGCTATTTTCAAGACTTATGCAAAGGCTGGGATGCTTGATGATGCTGTCTCTCTCTTTAGAAGCCTTCCCCAATTTAATTGTGTGAACTGGACATTGTCGTTCAACACCCTTCTACAGATATTGGTTAAAGAGTCAAAGCTTGAAACCTTCTGTCATTTGTTGATGGAGAAATCTAGTGGATGGGAAGTCAAATCTAGACTTGGTTCATTTAATTTGCTAATGGATGCTCTATGCCATATTAACCAATCAGACCTAGCATTGCAGGTTTTCCAGGAGATGAGCTACCACTGCTGTTATCCAGACAGGGAAAGTTATAAGATACTTATGAAGGGCCTTTGTCGCGATGGCAGGCTAAATGACGCCACACATTTGTTGTACGCTATGCTGTGGAGGATTTCTCAGAAAGGTTGTGGTGAAGATGTTGTAATTTATAGGACTCTCATAGATAGTTTATGTGACAATGGACAGGTTAATGAGGCTCTAGAAATTCTCGGAAAAGTTTTGAGGAAGGGCCTCAGGGCTCCCAAGAGCCGTTGCAAACTAACAGATCTTGACCAACTCTGTGGTACGGAAGATACAGAACATGCCAAGGTTTTGATTAATGAGGCTTTAATTAGAGGTGCCATCCCCAGTTCAGCTAGTTACACAGCTGTGGCTACTGATCTTTACACAGAAGGTAAAATATGTGAAGCCAACAAAGTACTTGATGAAATGCGTGAAAGAGGTTTTAGACCGACAGTAAGGGTATATGAATCGAAGGTAGCAGCAATGTGCAGAGCTGGTAGAGTTGATGAAGCTAGCAAGGTTATAGAGGAGGAAATGCTGAGGAAGGATTGTGTGCCAGATTCCAAAGTCTACAGCATTGTTGTGAAAGGCTTTTGTAATGAGGGTAAGTTGGATTTAGCCATTAGGTTTCTTGAGAAGATGGATAGGCAGAAAGGTTGTGCCCCTGACAAGGAGACATTCAGCTTCATTGTTGATCGATTGTGCCAGGATGGGAAGTTTGTTGACGCTAGTAGAATACTGGAAAGGATGTTATGCAAATCGTATTGGCCTGAACCTGATACTTTCGATGCTCTTATCGGAGGTCTTTGCTCCATTAACAGAATATATGAAGCTGTTTTGTGGCTGCAAGAGATGATTAGTCAGGGTAAGGTGCCTGAGTCTTCTATATGGAGTGTCTTAGTAGCATCAGTTGGCTCTAACATGGAAGGTCCTACTACTAGTCTTCTGCTGGATCAGCTGAGGAGCACTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99008.p1 GENE.R_Transcript_99008~~R_Transcript_99008.p1 ORF type:complete len:504 (+),score=90.89,PPR_1|PF12854.3|23,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|1.2e+04,PPR_1|PF12854.3|0.045,PPR_1|PF12854.3|3.6e-07,PPR_1|PF12854.3|3e-08,PPR_1|PF12854.3|18,PPR_1|PF12854.3|3.7e-05,PPR_1|PF12854.3|1.7e-08,PPR_1|PF12854.3|4.6e-06,PPR_1|PF12854.3|0.18,PPR_2|PF13041.2|3.6e+03,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|0.83,PPR_2|PF13041.2|22,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|20,PPR_2|PF13041.2|0.00029,PPR_2|PF13041.2|3.4e-08,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|0.075,PPR|PF01535.16|9.4e+02,PPR|PF01535.16|0.016,PPR|PF01535.16|0.053,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.011,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|0.11,PPR|PF01535.16|1.5,PPR|PF01535.16|0.001,PPR|PF01535.16|0.14,PPR|PF01535.16|0.015,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|9.3,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|6.5,PPR_3|PF13812.2|0.99,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|6.7,TPR_19|PF14559.2|29,TPR_19|PF14559.2|3.8e+02,TPR_19|PF14559.2|1.4e+03,TPR_19|PF14559.2|2.3,TPR_19|PF14559.2|4.9e+02,TPR_19|PF14559.2|3.2e+02,TPR_19|PF14559.2|8.1e+02 R_Transcript_99008:516-2027(+)
MVIRWPRLLNPTQLSQIIRQQKNPLTALEIFNEAKSKYPSYRHNGAVYATMINILGSSGRLFEMKQVIEQMKHDSCECKDPVFAAIFKTYAKAGMLDDAVSLFRSLPQFNCVNWTLSFNTLLQILVKESKLETFCHLLMEKSSGWEVKSRLGSFNLLMDALCHINQSDLALQVFQEMSYHCCYPDRESYKILMKGLCRDGRLNDATHLLYAMLWRISQKGCGEDVVIYRTLIDSLCDNGQVNEALEILGKVLRKGLRAPKSRCKLTDLDQLCGTEDTEHAKVLINEALIRGAIPSSASYTAVATDLYTEGKICEANKVLDEMRERGFRPTVRVYESKVAAMCRAGRVDEASKVIEEEMLRKDCVPDSKVYSIVVKGFCNEGKLDLAIRFLEKMDRQKGCAPDKETFSFIVDRLCQDGKFVDASRILERMLCKSYWPEPDTFDALIGGLCSINRIYEAVLWLQEMISQGKVPESSIWSVLVASVGSNMEGPTTSLLLDQLRSTS*

Click here to download the sequence:
Link to NCBI Protein BLAST