Transcript Information: R_Transcript_99190.p1


Annotated TAIR IDAT2G23630.1
Annotated Gene NameSKU5 similar 16
Annotated Gene Symbol(s)sks16
Annotation TypeOrtholog
Chromosome Positionchr2:10052581-10055311 | Reverse length=541
E-Value2.7E-275
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 147.328774222737
Replicate 241.563308444902
Replicate 341.044786324704
Condition 2: 8 Hour
Replicate 130.265985483119
Replicate 219.908666174587
Replicate 332.052100537858
Condition 3: 24 Hour
Replicate 185.643715810413
Replicate 285.351392212234
Replicate 368.144805484299


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99190.p1 GENE.R_Transcript_99190~~R_Transcript_99190.p1 ORF type:complete len:538 (+),score=78.59,Cu-oxidase_3|PF07732.11|2.1e-40,Cu-oxidase_3|PF07732.11|2.9e+03,Cu-oxidase_3|PF07732.11|2.8e+03,Cu-oxidase|PF00394.18|8e+03,Cu-oxidase|PF00394.18|9.8e-34,Cu-oxidase|PF00394.18|7.9e+02,Cu-oxidase_2|PF07731.10|1.7e+03,Cu-oxidase_2|PF07731.10|2.3e-24 R_Transcript_99190:316-1929(+)
ATGGGACAGAACCAGTTCCTACCTTTCCTTCTAGGTTTTTTGGCTTGTTCAAGTGTTTTCCTTGTCAACGCAGAAAGTCCCTATAGGTACTATGATTGGGTAGTCACATATGGGACCATTTCTCCCTTGGACACCCCTCAAAGGGGTATTCTCATCAATGGACAGTTTCCTGGTCCAACAATTGATTGTGAGACCAACGACAACGTTATTGTCAATGTCTACAACAAGTTGGATGAGCCTTTCCTTATCACATGGAATGGGATACAACAGAGGAAGATGTCATGGCAAGACGGAGTGCTTGGGACTAATTGCCCTATTCCTCCAAATTCAAACTGGACCTATAAGATGCAAATGAAGGATCAGATTGGTACCTACTATTACTTTCCTTCAACCCTGATGCATAGAGCGGCTGGTGGTTTCGGTGCAATGAATATCCACAGAAGACCTGTCATCTCTATTCCTTACCCTGAACCAGCTGGTGAATTTACTCTCCTTATCGGAGATTGGTATAAAACTGACCACAAGAAATTGCAAGAACACCTGGATTCAGGAAAGAAAATGCCTTTTCCTAATGGCCTGCTTATCAATGGGAGTCCACACAACACTGTCTTCACTGGTGAAGCAGGGAAAACTTACCTGATTAGAGTTTCAAATGTGGGCATTATGACCTCAATCAACTTCAGGATTCAGAGCCATACACTAAAGCTGATTGAGGTTGAAGGTTCTCATGACCTCCAAGAATCGTATGAGTCACTTGACATTCATCCTGGCCAGACCATGGCTTTCTTAGTGACCTTGCATGTGATGGTGAAGGACTATTACATTGTTGCTTCAACTCGCTTCACAAGGAAGACTCTCACTGCCAAAGCTGTCCTCAGTTATGCTGGTTCAACTACTCGTCCCTCTGGTCCATTGCCTGTCGGCCCTACTTATCAACTTCATTGGTCAATGAAACAAGCCAGAACTCTCAGATGGAACCTTACAGCAAACGCTGCAAGGCCAAACCCACAAGGGTCGTACCACTATGGAGGCATCCCAATCACAAGGACTCTAATCCTGGCAAATTCAGCAGGCAGGATCAATGGCAAAGCGAGATATGCTGTAAACAAGGTTTCCTACGTCAACCCTGATACTCCACTAAAGCTTGCTGACTATTACAACATACCTGGAGTCTTCAACCTGAACACAATCAAGGATGCACCATCGCCAGGTGCTGTGGTCTACGGCACCTCAGTTGTTAACCTGACTCTTCACGACTATGCTGAAATCATCTTCCAAAACAACGAGAATAGCCTCCAATCTTGGCATATCGATGGCCACAGTTTCTTCACTGTCGGATATGGTGCAAAGGAGTGGACTCCAGCATTAAGGAAAAAGTATAATTTGGTGGATGCCACCAGTCGCAATACTGTTCAGGTGTATCCAAGATCTTGGACTGCTATTTTGGTATCATTGGATAACAAGGGTATGTGGAATGTGAGATCAACAGTCTGGCACAGAAGATACCTGGGACAAGAACTGTATTTTAGGGTATGGAACAATGAACCAGACCTTAGGACAGAGAATGACATCCCTGATAATGCTCTCAAGTGTGGAAAGGCTGCTAATTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99190.p1 GENE.R_Transcript_99190~~R_Transcript_99190.p1 ORF type:complete len:538 (+),score=78.59,Cu-oxidase_3|PF07732.11|2.1e-40,Cu-oxidase_3|PF07732.11|2.9e+03,Cu-oxidase_3|PF07732.11|2.8e+03,Cu-oxidase|PF00394.18|8e+03,Cu-oxidase|PF00394.18|9.8e-34,Cu-oxidase|PF00394.18|7.9e+02,Cu-oxidase_2|PF07731.10|1.7e+03,Cu-oxidase_2|PF07731.10|2.3e-24 R_Transcript_99190:316-1929(+)
MGQNQFLPFLLGFLACSSVFLVNAESPYRYYDWVVTYGTISPLDTPQRGILINGQFPGPTIDCETNDNVIVNVYNKLDEPFLITWNGIQQRKMSWQDGVLGTNCPIPPNSNWTYKMQMKDQIGTYYYFPSTLMHRAAGGFGAMNIHRRPVISIPYPEPAGEFTLLIGDWYKTDHKKLQEHLDSGKKMPFPNGLLINGSPHNTVFTGEAGKTYLIRVSNVGIMTSINFRIQSHTLKLIEVEGSHDLQESYESLDIHPGQTMAFLVTLHVMVKDYYIVASTRFTRKTLTAKAVLSYAGSTTRPSGPLPVGPTYQLHWSMKQARTLRWNLTANAARPNPQGSYHYGGIPITRTLILANSAGRINGKARYAVNKVSYVNPDTPLKLADYYNIPGVFNLNTIKDAPSPGAVVYGTSVVNLTLHDYAEIIFQNNENSLQSWHIDGHSFFTVGYGAKEWTPALRKKYNLVDATSRNTVQVYPRSWTAILVSLDNKGMWNVRSTVWHRRYLGQELYFRVWNNEPDLRTENDIPDNALKCGKAANL*

Click here to download the sequence:
Link to NCBI Protein BLAST