Transcript Information: R_Transcript_99287.p2


Annotated TAIR IDAT3G22430.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7953455-7957605 | Forward length=510
E-Value1E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7160903461701
Replicate 20.80755001601146
Replicate 30.68524428706439
Condition 2: 8 Hour
Replicate 11.67424717588
Replicate 21.4333898616145
Replicate 31.0859937978009
Condition 3: 24 Hour
Replicate 11.4716543094682
Replicate 20.754025944977
Replicate 31.4965951922665


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99287.p2 GENE.R_Transcript_99287~~R_Transcript_99287.p2 ORF type:3prime_partial len:234 (+),score=59.94,XS|PF03468.10|7.2e-15 R_Transcript_99287:3104-3802(+)
ATGCATACCCAGCCCAGCAGAATGGATCCACGGAGCAAGGAAAAGCTGGTTTTTTTGAAGTGCATCATATGTTCCAGCTCCCGTGAGTTTAAGGCGACAAAAGATACTGCATTGCACGCCTTCAAGTCTCCCAAAGTTGGCCTGAGAGCACCACACTTGGGGTTCCATAGAGCTTTATGTGTCTTGATGGGATGGGATAGTGCAGTGGGCCCCAATGGCCAGTGGGTTTGCAGATCTTTGTCTGACGCTGAGGCTTGTGCTTTGAAAGATGATATAATCATATGGCCTCCTGTTGTTGTTGTCCACAATCGTGGTAGAAACAATCTCAAAAAGCAGGTGAAGTTCTCCAAAGAAAATGTAGGGAATGTTTTGAAAGATGAGGGTTTTGACATGCGAAATGCCAAGGTAAGCTATGGAAGAGCTGGGAACCCAAACATTATGGTGGTGACATTCACTGGCACTCTTTCTGGCCTTGAAGAAGCAGAGAAGCTTCATAACTTCTTCAGTAAGAAGAAGCGCAGAAGGATAGAGCTGCAACAAGCTATTGGTGCAGCCAGTGGCAGCAAAGATGCTCCTCAAGTGCCAGAAGACAATATAAAACGTAGCCATACAATCAGTGGCGTCAAGAATGCTCCTGAACTTCCAGTGGGCAATGTCAAACATAGCCATACAGCCAGTGACAACAAAGATGCTTCCCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99287.p2 GENE.R_Transcript_99287~~R_Transcript_99287.p2 ORF type:3prime_partial len:234 (+),score=59.94,XS|PF03468.10|7.2e-15 R_Transcript_99287:3104-3802(+)
MHTQPSRMDPRSKEKLVFLKCIICSSSREFKATKDTALHAFKSPKVGLRAPHLGFHRALCVLMGWDSAVGPNGQWVCRSLSDAEACALKDDIIIWPPVVVVHNRGRNNLKKQVKFSKENVGNVLKDEGFDMRNAKVSYGRAGNPNIMVVTFTGTLSGLEEAEKLHNFFSKKKRRRIELQQAIGAASGSKDAPQVPEDNIKRSHTISGVKNAPELPVGNVKHSHTASDNKDASQ

Click here to download the sequence:
Link to NCBI Protein BLAST