Transcript Information: R_Transcript_99289.p1


Annotated TAIR IDAT3G22430.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7953455-7957605 | Forward length=510
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3094515467516
Replicate 20.57055164174723
Replicate 31.319627274561
Condition 2: 8 Hour
Replicate 11.1178329649829
Replicate 20.94790694761548
Replicate 31.4600208542485
Condition 3: 24 Hour
Replicate 11.0730279465123
Replicate 20.69522011720298
Replicate 31.1895491677662


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99289.p1 GENE.R_Transcript_99289~~R_Transcript_99289.p1 ORF type:complete len:920 (+),score=183.88 R_Transcript_99289:682-3441(+)
ATGATGAAGGAAGGAGGAGGATTTGTGGAAAATGGTAGTGTGATTAGGAGGAGTGATTTAGGTTTAAATTTTGAAGGGAGTGAGGGAAGAGAACGGCTTGTTTCGAGGCGTTTTGATGGTGAAGAAAGAGAGATAGGTGGATATCTTGTGATGAGAGTGGAGGATAGTCAGTTGCGAATGATGCCGATGGTTAATGATCAGAGTTTGTCAACTACAGATAATGAAACTGCTACTAAGAAATTTCAGTGGCCAAAGATGTTGTTGGAATCAAGGAATTCCGAGGTCGATGTTGTGGCAAAGGATTTGCGGGGTGAACATGTCGACTATGGCAGGACTTATGCTAGGGTAGTAGAGAATTCACTACCAGTGCCTATTAGCAGTGAAAGGATAAGGGATTCACTTTCCTATGGAAGAAGTGCTGATACTGCTGAAGGTCATGGAGTTATTACTAGGAATGCAAGTGGTCCTTTATTCGAAGATGGTGTCGATTTTTCGATCAGGGAGTACCCGCCACCGCCACCACAACCACGCTTGACCAGGGATATGTCAAGAAAATATTATAATAGCCTGGAAATATTAAGGAAGCATTATGAGGGAGGAAGCTGTAATAGGTGCTGCTCCGGTTACAGTCCACCACACTGCTATAGGGAATTCAACAGGGAAGATTCAATGAAACATTATGGAGAGGGAAGTCATGTTAGGAGCCACTCTGATTATAGCCTACCGCCTTTCGATGGGGAAATGTCGAGGAGACATTATGAGGAGGGAAGTCATCTGAAGGGCCACTCTGATTATAGCCCACCACATCGCCATAGGGAAATGTCGAGGAGACATTATAAGGAGGAAAGCCGTCATATATGCCCCTCTAATTATAGCCCACCACATTGGGAGAGGGAAGTGTCAAGGAACCACTATGAGGAAGGAAATCTCCGTGGATTCTGCTCTAATGATAGTAGCCCTCAAAATGTGACACCGCGTTCACAATCTAGTGCTCAGTGTACTCCCTTTGTAGGAAATCGGATGGAAAATGACCAGGGTTTGCACCCTGAAGTCCTCCATCACCAAGCTGATGGTTTCAGAAATGTTGATAGTATTCAGCCAGCAAGATGTGAGAGATCCCATCAAATTGTGCACTCTAAAGCTGGCGCAAGTATTCATCCTTTTTCAGATGAGGCTGCTGTTAGGTATTCAGGAGCCAAACAATTTCCAAATGTGGACAGGCCAGGTTATTGTATCCATCCAGAGGGCCAAAGGTCTAGAAAGGTGTATCCAAGTGCATTACCAGAAGATGATTACCAGCAGCACATTGGGAGGGTTCAAGACTATGAAGACCTAGAGAATAATGCACTGGATCATACCTTACATAGACTTGGTAATATCGGCAACTCGCACAAGCATGTCGTGATGGCGGATAGACTGCAAAGTTATGATCGTGGTTTGAAAGAGGAGCCTATTCTGGGTACCTATGATGTAAGCCAGCCTGCCAATGATTCTGAGTATGATGGGATAGTGTTGCATGCTGGAAACTCTTTTCTTGAACATGGGATTCAAGCGATTGAGAGTCATGAGAGCTTGCCTCCTGAAAAAGATCGTGTTTATGAAATGCATCCCCATCATATGGATTATGAACATCAAAATTTCTATGTTCCAAAAACTGAATGTATCTTGGATGAGAATACCCAGCACACGATGGAGTCAGGAGATTTTGGTTTCCATGGCCAATTTAAGAGGACGCTTAAAAGAAAGCAAAGATTTTCTGGAAAAATGACTGGCTCAAAACGCAGGGCTTCTACCTGTGTAGGGAGCTATGACAATGGGCCGCTTACTGCTGAACCCAATGAAGAATTAGTTCCTCAAGCTAGGAAATTCAGCCATCGTGGACAATTTCAGGCTACAGAAAATGTGGGATTGGCTGAAGCTGGACCTGGACAGGAGTTTTGTGGTCTGTCTGAGGGTCTTCGTAGCCGTTTAGGCAAGCCTGATATCAAAAAACGCCTGAAGCACCCTCATGCTGTTCATTCTAAGTTTATCCCTCATCCCCCAAAATCTTGGAAGAAGAATACCAAGCACTTCGTGAAGCCTCCTCCATATGCAACGAATACGACATCTGCTACACAACCTAATGGCAACGCTACAGGTTATCACTTGAAAAAAAAGCTCAAAGCTGCTCATCAATCTGGTCTTGGCCCTCCTGCTACACAAGATTCTCATGTTACACATTGTGAGGCTAATATAGAGAAGCAACAGAAGCTGTCCACTAAAAACTTTGGTGATACAAAAGAAGCATCTCGTTCACAAGAAGCTGAAAATCCAGAACATTTGAAGCTCAAGGTGAAACCTGATGAGAAGGATCTGCCTGAAGACTCGCAAGGTTTTAGGAGGAAAGTAGACGAATGGTTTTTAAAATGCATTTTACACTTAAATGCATACCCAGCCCAGCAGAATGGATCCACGGAGCAAGGAAAAGCTGGTTTTTTGAAGTGCATCATATGTTCCAGCTCCCGTGAGTTTAAGGCGACAAAAGATACTGCATTGCACGCCTTCAAGTCTCCCAAAGTTGGCCTGAGAGCACCACACTTGGGGTTCCATAGAGCTTTATGTGTCTTGATGGGATGGGATAGTGCAGTGGGCCCCAATGGCCAGTGGGTTTGCAGATCTTTGTCTGACGCTGAGGCTTGTGCTTTGAAAGATGATATAATCATATGGCCTCCTGTTGTTGTTGTCAACAATCTGGTGGAAACAGTCTCAAAGAGCAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99289.p1 GENE.R_Transcript_99289~~R_Transcript_99289.p1 ORF type:complete len:920 (+),score=183.88 R_Transcript_99289:682-3441(+)
MMKEGGGFVENGSVIRRSDLGLNFEGSEGRERLVSRRFDGEEREIGGYLVMRVEDSQLRMMPMVNDQSLSTTDNETATKKFQWPKMLLESRNSEVDVVAKDLRGEHVDYGRTYARVVENSLPVPISSERIRDSLSYGRSADTAEGHGVITRNASGPLFEDGVDFSIREYPPPPPQPRLTRDMSRKYYNSLEILRKHYEGGSCNRCCSGYSPPHCYREFNREDSMKHYGEGSHVRSHSDYSLPPFDGEMSRRHYEEGSHLKGHSDYSPPHRHREMSRRHYKEESRHICPSNYSPPHWEREVSRNHYEEGNLRGFCSNDSSPQNVTPRSQSSAQCTPFVGNRMENDQGLHPEVLHHQADGFRNVDSIQPARCERSHQIVHSKAGASIHPFSDEAAVRYSGAKQFPNVDRPGYCIHPEGQRSRKVYPSALPEDDYQQHIGRVQDYEDLENNALDHTLHRLGNIGNSHKHVVMADRLQSYDRGLKEEPILGTYDVSQPANDSEYDGIVLHAGNSFLEHGIQAIESHESLPPEKDRVYEMHPHHMDYEHQNFYVPKTECILDENTQHTMESGDFGFHGQFKRTLKRKQRFSGKMTGSKRRASTCVGSYDNGPLTAEPNEELVPQARKFSHRGQFQATENVGLAEAGPGQEFCGLSEGLRSRLGKPDIKKRLKHPHAVHSKFIPHPPKSWKKNTKHFVKPPPYATNTTSATQPNGNATGYHLKKKLKAAHQSGLGPPATQDSHVTHCEANIEKQQKLSTKNFGDTKEASRSQEAENPEHLKLKVKPDEKDLPEDSQGFRRKVDEWFLKCILHLNAYPAQQNGSTEQGKAGFLKCIICSSSREFKATKDTALHAFKSPKVGLRAPHLGFHRALCVLMGWDSAVGPNGQWVCRSLSDAEACALKDDIIIWPPVVVVNNLVETVSKSR*

Click here to download the sequence:
Link to NCBI Protein BLAST