Transcript Information: R_Transcript_99318.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.75569583570492
Replicate 21.1367423792263
Replicate 30.7295139361832
Condition 2: 8 Hour
Replicate 11.0137460010006
Replicate 21.0681949924133
Replicate 30.5780767713499
Condition 3: 24 Hour
Replicate 11.3891666793834
Replicate 20.84287613594563
Replicate 31.1850031199913


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99318.p1 GENE.R_Transcript_99318~~R_Transcript_99318.p1 ORF type:complete len:314 (+),score=34.79,PIF1|PF05970.10|2.6e-68 R_Transcript_99318:75-944(+)
ATGGCAAGAAAGGAAAGTATAGAAGCTGTTGATCGACCGTTACAAGATGTATGTAGCTCCGACTTACCATTTGGTGGAAAAGTTATTATCTTTGGTGGTGATTTCAGACAAGTATTGCCTGTGATTCCCAAACGCACGCAACATGAGTTGGTCGAGCATAGTCTGGTCAGCTCTTATTTGTGGCCATTGTTTACCCAATTCACACTTGCACAAAACATGCGAGCAAGAGAGGATCCAGCTTTCACCGACTTCTTGCTTTGTCTGGGAAATGGAGGCTTTCAAGACTGTGAACAAACAAACATTTTGCTTCCATATAGCTTCTTTTCAGTGGCTCCATCAAATGGTGATTGTCTGCAACAACTTATCGACTCGATCTTCCCAGATTTGGCTGACCTAGCAGCTCATCCATATGCATTTACGTCACGCGCAACACTCACCCCGACAAATGATGAGGTTGATTCTATCAATGAAATGGTTATAGACAAATTCCCAGGCAAAGCATACATTTATAAAAGTTATGACACCACTGTGGATGATGATTGCAATGCTCATCCTGTTGAATTCCTCAACACTCTGTGCCCGGGAGGAATGAGCCTACACCGTCTAACACTAAAAGTCAATTGTCCAGTAATAGTGCTTCGTAATCTCAACCCTTCTGTTGGGCTATGCAATGGAACAAGGCTTATTTGTCGAGAATTCAAAGCTAACCTTATTGTATGTGAAATAGCAACAGGATATCGTGCTGGAGATTATGTATTTATTCCACGAATCAGCCTAAGGCCCTCATCTTCTATCAATTATCCATACAGATTTGAAAGGAAGCAATATCCAATCAAGTTGTGCTTTGCAATGACAATTAACAAAGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99318.p1 GENE.R_Transcript_99318~~R_Transcript_99318.p1 ORF type:complete len:314 (+),score=34.79,PIF1|PF05970.10|2.6e-68 R_Transcript_99318:75-944(+)
MARKESIEAVDRPLQDVCSSDLPFGGKVIIFGGDFRQVLPVIPKRTQHELVEHSLVSSYLWPLFTQFTLAQNMRAREDPAFTDFLLCLGNGGFQDCEQTNILLPYSFFSVAPSNGDCLQQLIDSIFPDLADLAAHPYAFTSRATLTPTNDEVDSINEMVIDKFPGKAYIYKSYDTTVDDDCNAHPVEFLNTLCPGGMSLHRLTLKVNCPVIVLRNLNPSVGLCNGTRLICREFKANLIVCEIATGYRAGDYVFIPRISLRPSSSINYPYRFERKQYPIKLCFAMTINKA*

Click here to download the sequence:
Link to NCBI Protein BLAST