Transcript Information: R_Transcript_99386.p1


Annotated TAIR IDAT1G09190.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2966263-2967717 | Reverse length=484
E-Value7.5E-206
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2158944368897
Replicate 21.6416860407805
Replicate 31.5553957627017
Condition 2: 8 Hour
Replicate 12.670269222642
Replicate 21.8864118425692
Replicate 32.6517785062705
Condition 3: 24 Hour
Replicate 12.2201994644076
Replicate 22.6774902768396
Replicate 32.8823314814021


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99386.p1 GENE.R_Transcript_99386~~R_Transcript_99386.p1 ORF type:complete len:486 (+),score=80.94,PPR|PF01535.16|9.5e+03,PPR|PF01535.16|0.00026,PPR|PF01535.16|8.9,PPR|PF01535.16|18,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|9.2e-06,PPR|PF01535.16|5.5,PPR|PF01535.16|0.096,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|4.4,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|1.5e+02,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|0.00014,PPR_2|PF13041.2|4.3e-09,PPR_2|PF13041.2|6.2e+02,PPR_2|PF13041.2|2.4e+02,PPR_2|PF13041.2|1.1e+02,PPR_1|PF12854.3|8.8,PPR_1|PF12854.3|0.001,PPR_1|PF12854.3|5.7e+02,PPR_1|PF12854.3|4.7e-07,PPR_1|PF12854.3|4.4e-05,PPR_1|PF12854.3|1.9e-06,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|1.9e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|0.0006,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|6.7,PPR_3|PF13812.2|12,PPR_3|PF13812.2|20,PPR_3|PF13812.2|13,PPR_3|PF13812.2|90 R_Transcript_99386:396-1853(+)
ATGAGGTGGACAAGCCGAGAGGTGGAGAAGAAGATTCTTCGCCATCTCCATGACCGTAAAACCCGAACTCAGGTCCTCGAAATCCACGCTCACTTCCTCCGTTATGGGCTGGATCAATCAAACCAGGTCCTCTCTCACTTTATCTCTGTTTGTAGAGCACAGGGTAAAATGAAGTACTCAGAGCTTGTATTTCAGCAAGCCGAGTTCCCGGATCTCCTCCTTTTCAATTCCATGATAAAGGGTTATTCCCTTTCTGGGCCCTTTGCGCGATCACTATCTCTCTTTTCTTGTATGAAAAATCGTGGGGTTTTGCCCAATGAATATACTTTTGCTCCTTTAATCAAGTCTTTTTGTAATCTTGGTGATGTAAGGGCAGGTAGATGTGTTCATGGTGAGATTATTAAACTTGGGCTTGAGCGTCATAGCGCTTTGAGAATTGGGATTGTCGAGTTGTATGCAAACTGTGAGAAAATGGGTGATGCCTTGATGTTGTTCGAAGGAATGCCTCACAGAGATGTGATCATTTGGAACTTAATGATTCGTGGGTTTTGTAAGGTTGGGGATGTTGATATGGGTTTGCATCTTTTTAGGCAGATGAGAGTACGGAGCATCGTTTCGTGGAATTCGATGATATCTTCATTGGCTAAGTGTGGGAGGGACCACGAAGCTTTGGGACTATTCCATGAAATGCGAATTGATGGTGCTTTTGAACCAGATGAAGCTACTGTTGTCACTGTTCTACCTGTGTGTGCTCGAGTGGGTGCTGTTGACGTTGGAAAATGGTTACATTCCTATGCTCAATCAAGTGGATTTTTTCGAGATTTCATCACTGTTGGGAACTCCATAGTGAATTTCTATTGCAAATGTGGAGACTTGGAAACTGCCTACAGAGTCTTTCGAGAAATGCCTCGGAAAAATGTGATTTCCTGGAATGCCCTTATCTCAGGGCTGGCTTTCTATGGGAAGGGTGAGCTAGGGGTTGATTTGTTTGAGGAGATGATCAGTAGAGGTGCAACTCCTAATGACTCAAGTTTCGTTGGGGTTTTAACATGCTGTGTCCATGCTGGGTTGTTGCAGAAAGGTAGGGACTTGTTTTCTATCATGACAGTCAAACACAAAATTCTTCCCAAACTTGAGCATTATGGATGCATGGCTGACCTACTTGGACGAAGTGGACGCGTGAGGGAGGTGTATGAAATGATCAAAAGCATGCCCATGAAGCCAAATGCTGCACTGTGGGGATCCCTGCTGAGTGCTTCACGTACTTTTGGTGATGTGCAACTTGCAGAATATGCTCTTAAAGAGCTTATTGATCTTGAGCCATGGAATTCTGGAAATTATGTACTGTTGTCCAATATCTATGCAGAAGAAGGGAGATGGGACAAGGTTGATCAATTAAGAGTGTTAATGAAGGAAAGATCTGTCAAGAAGTCCATTGGATGCAGTGCAGTTGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99386.p1 GENE.R_Transcript_99386~~R_Transcript_99386.p1 ORF type:complete len:486 (+),score=80.94,PPR|PF01535.16|9.5e+03,PPR|PF01535.16|0.00026,PPR|PF01535.16|8.9,PPR|PF01535.16|18,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|4.4e-08,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|9.2e-06,PPR|PF01535.16|5.5,PPR|PF01535.16|0.096,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|4.4,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|1.5e+02,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|0.00014,PPR_2|PF13041.2|4.3e-09,PPR_2|PF13041.2|6.2e+02,PPR_2|PF13041.2|2.4e+02,PPR_2|PF13041.2|1.1e+02,PPR_1|PF12854.3|8.8,PPR_1|PF12854.3|0.001,PPR_1|PF12854.3|5.7e+02,PPR_1|PF12854.3|4.7e-07,PPR_1|PF12854.3|4.4e-05,PPR_1|PF12854.3|1.9e-06,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|1.9e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|0.0006,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|6.7,PPR_3|PF13812.2|12,PPR_3|PF13812.2|20,PPR_3|PF13812.2|13,PPR_3|PF13812.2|90 R_Transcript_99386:396-1853(+)
MRWTSREVEKKILRHLHDRKTRTQVLEIHAHFLRYGLDQSNQVLSHFISVCRAQGKMKYSELVFQQAEFPDLLLFNSMIKGYSLSGPFARSLSLFSCMKNRGVLPNEYTFAPLIKSFCNLGDVRAGRCVHGEIIKLGLERHSALRIGIVELYANCEKMGDALMLFEGMPHRDVIIWNLMIRGFCKVGDVDMGLHLFRQMRVRSIVSWNSMISSLAKCGRDHEALGLFHEMRIDGAFEPDEATVVTVLPVCARVGAVDVGKWLHSYAQSSGFFRDFITVGNSIVNFYCKCGDLETAYRVFREMPRKNVISWNALISGLAFYGKGELGVDLFEEMISRGATPNDSSFVGVLTCCVHAGLLQKGRDLFSIMTVKHKILPKLEHYGCMADLLGRSGRVREVYEMIKSMPMKPNAALWGSLLSASRTFGDVQLAEYALKELIDLEPWNSGNYVLLSNIYAEEGRWDKVDQLRVLMKERSVKKSIGCSAVV*

Click here to download the sequence:
Link to NCBI Protein BLAST