Transcript Information: R_Transcript_9940.p1


Annotated TAIR IDAT5G10690.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3374443-3377332 | Reverse length=580
E-Value2.4E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2554946688431
Replicate 20.83318652445627
Replicate 30.54539851419411
Condition 2: 8 Hour
Replicate 11.4898806713932
Replicate 20.76902503686617
Replicate 31.440604017491
Condition 3: 24 Hour
Replicate 11.2146987951166
Replicate 20.40843072019588
Replicate 30.52113582587851


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_9940.p1 GENE.R_Transcript_9940~~R_Transcript_9940.p1 ORF type:complete len:378 (+),score=75.38,PPR_2|PF13041.2|1.4e+04,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|0.096,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|3.5e-08,PPR_2|PF13041.2|0.00049,PPR_2|PF13041.2|33,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|6.9e-06,PPR_3|PF13812.2|0.0005,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|1.5e+03,PPR|PF01535.16|0.002,PPR|PF01535.16|0.066,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.00042,PPR|PF01535.16|0.017,PPR|PF01535.16|0.85,PPR|PF01535.16|1.3e+02,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|28,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|1.5e+03 R_Transcript_9940:144-1277(+)
ATGTATCATCAACTTTTCAATCCCTACAAACTAATTCCAAGCTCAACCATCTTTCCCATTTCTACCCTTCTATCTTCCCACCATCACAGCCTTGGCTATGTCTATACTTATGCAGTACATTACCCTTCAATCCTTAGTTATCATGTTTCTTCACTCAGAAAGTCCCGCCGTCCTTCCAAATCCACTTTCAAACGCCTCACTTCTCGTGTTGTTCTGCTCACTCGCCGCAAACAACTCCACCAGGTTTTTGAAGAGATTGAGCTAGCGAAACGGAAATATGGAGGGCTGAATACTATTGTGATGAACGCGGTGCTGGAGGCGTGTGTTCAGTGTGGTGACATTGATTCTGCCCTTAGCTTGTTTGATGAGATTTCTAACTCTAGGAGTTGTTGTGTTGATAATGTATCTTATGCCATTCTTTTGAAGGGTTTGGGTATGGCTCGAAGAGTTGATGAAGCATTTCAACTTCTTGAATCTGTGGATCGGGGCAATGCTGCTGGAAATCCAAAGTTATCCGCGCCACTTCTCCATGGCCTGCTTAATGCACTTATTGATGCAGGAGATCTACGCCGTGCTAATGGTCTTCTTGCACGCTATGGATTTGTGTTCCTTGAAGGTGGCAATCCTTCCATCTTGATCTACAACTTGTTAATGAAGGGTTACATTACAACAGGGTCACCTGAGGCTGCATTCACTGTTCATAATGAAATGCTACGACAAGGATTAAGGCCTGACAGACTTGCCTATAACACCCTAATCCTTGCTGCGGTGAAGACAAAGAAAAAGGATGCTGCGATGCAGTTCTTGGAGGAAATGAAGGATGCTGCATTGAAGCATGATTCTAATGATCTTCTCCCAGACAATGTTACATATACTACTTTATTGAAGGCTGCTGGACTTGCTAAAGATATTCATCTGGTTCAGAAGATAGTGATGGAAATGAAAATGTCTCAAGTGTTATCTATTGATCGCTTTGCTTATACTGCACTAGTTGATGCACGGCTTTGTTGTGGCTCAATCAATGGTGCTTTATGTGTGTTCGGAGAAATATTAAAGAAGGCTGGAGAAAACTCAGATATGAGGCCAAAGCCTCATCTTTATATTTCGTTGATGCATGCTTTGGTGCAAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_9940.p1 GENE.R_Transcript_9940~~R_Transcript_9940.p1 ORF type:complete len:378 (+),score=75.38,PPR_2|PF13041.2|1.4e+04,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|0.096,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|3.5e-08,PPR_2|PF13041.2|0.00049,PPR_2|PF13041.2|33,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|6.9e-06,PPR_3|PF13812.2|0.0005,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|1.5e+03,PPR|PF01535.16|0.002,PPR|PF01535.16|0.066,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.00042,PPR|PF01535.16|0.017,PPR|PF01535.16|0.85,PPR|PF01535.16|1.3e+02,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|28,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|1.5e+03 R_Transcript_9940:144-1277(+)
MYHQLFNPYKLIPSSTIFPISTLLSSHHHSLGYVYTYAVHYPSILSYHVSSLRKSRRPSKSTFKRLTSRVVLLTRRKQLHQVFEEIELAKRKYGGLNTIVMNAVLEACVQCGDIDSALSLFDEISNSRSCCVDNVSYAILLKGLGMARRVDEAFQLLESVDRGNAAGNPKLSAPLLHGLLNALIDAGDLRRANGLLARYGFVFLEGGNPSILIYNLLMKGYITTGSPEAAFTVHNEMLRQGLRPDRLAYNTLILAAVKTKKKDAAMQFLEEMKDAALKHDSNDLLPDNVTYTTLLKAAGLAKDIHLVQKIVMEMKMSQVLSIDRFAYTALVDARLCCGSINGALCVFGEILKKAGENSDMRPKPHLYISLMHALVQR*

Click here to download the sequence:
Link to NCBI Protein BLAST