Transcript Information: R_Transcript_9941.p2


Annotated TAIR IDAT5G10690.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3374443-3377332 | Reverse length=580
E-Value3E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1299452019588
Replicate 20.099982382934753
Replicate 30.76355791987175
Condition 2: 8 Hour
Replicate 11.8655897102663
Replicate 20.42592155887972
Replicate 31.4694160978408
Condition 3: 24 Hour
Replicate 11.3118746987259
Replicate 20
Replicate 30.62536299105421


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_9941.p2 GENE.R_Transcript_9941~~R_Transcript_9941.p2 ORF type:complete len:210 (+),score=31.81,PPR_2|PF13041.2|4.3e+03,PPR_2|PF13041.2|6.3e-09,PPR_2|PF13041.2|0.041,PPR|PF01535.16|0.00091,PPR|PF01535.16|0.03,PPR|PF01535.16|1.4e+04,PPR_1|PF12854.3|3.6,PPR_1|PF12854.3|6e-06,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|0.0087,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|1.6e+04 R_Transcript_9941:145-774(+)
ATGCATTATCAACTTTTCAATTCTTCACCCTACAAACTAATTCCAATCTCAACCATCTTTCCCATTTCTACCCTTCTATCTTCCCACCAATACTATCACAACCATGGCTACCCTTCAATCCTTAGTTATCATGTTTCTTCACTCAGAAAGTCCCGCCGTCCTTCCAAATCCACTTTCAAACGCCTCACTTCTCGTGTTGTTCTGCTCACTCGCCGCAAACAACTCCACCAGGTTTTTGAAGAGATTGAGCTAGCGAAACGGAAATATGGAGGGCTGAATACTATTGTGATGAACGCGGTGCTGGAGGCGTGTGTTCAGTGTGGTGACATTGATTCTGCCCTTAGCTTGTTTGATGAGATTTCTAACTCTAGGAGTTGTTGTGTTGATAATGTATCTTATGCCATTCTTTTGAAGGGTTTGGGTATGGCTCGAAGAGTTGATGAAGCATTTCAACTTCTTGAATCTGTGGATCGGGGCAATGCTGCTGGAAATCCAAAGTTATCCGCGCCACTTCTCCATGGCCTGCTTAATGCACTTATTGATGCAGTGCAGGAGATTTACGACGTGCTAATGTTCTTCTTGCACGCTACGGATTTGTGTTCCTTGAAGGTGGCAATCCTTCCATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_9941.p2 GENE.R_Transcript_9941~~R_Transcript_9941.p2 ORF type:complete len:210 (+),score=31.81,PPR_2|PF13041.2|4.3e+03,PPR_2|PF13041.2|6.3e-09,PPR_2|PF13041.2|0.041,PPR|PF01535.16|0.00091,PPR|PF01535.16|0.03,PPR|PF01535.16|1.4e+04,PPR_1|PF12854.3|3.6,PPR_1|PF12854.3|6e-06,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|0.0087,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|1.6e+04 R_Transcript_9941:145-774(+)
MHYQLFNSSPYKLIPISTIFPISTLLSSHQYYHNHGYPSILSYHVSSLRKSRRPSKSTFKRLTSRVVLLTRRKQLHQVFEEIELAKRKYGGLNTIVMNAVLEACVQCGDIDSALSLFDEISNSRSCCVDNVSYAILLKGLGMARRVDEAFQLLESVDRGNAAGNPKLSAPLLHGLLNALIDAVQEIYDVLMFFLHATDLCSLKVAILPS*

Click here to download the sequence:
Link to NCBI Protein BLAST