Transcript Information: R_Transcript_99449.p1


Annotated TAIR IDAT5G50390.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20520789-20522980 | Reverse length=701
E-Value9.6e-312
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5815997137665
Replicate 24.4800072012016
Replicate 35.2134822409451
Condition 2: 8 Hour
Replicate 15.8166990699715
Replicate 26.9977155121776
Replicate 38.8046930605291
Condition 3: 24 Hour
Replicate 16.0415282178169
Replicate 26.305984405414
Replicate 37.1609844637075


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99449.p1 GENE.R_Transcript_99449~~R_Transcript_99449.p1 ORF type:complete len:703 (+),score=111.04,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|0.037,PPR_2|PF13041.2|3.4,PPR_2|PF13041.2|6.2e-08,PPR_2|PF13041.2|0.24,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|3.1e-12,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|3.4,PPR_2|PF13041.2|16,PPR|PF01535.16|1e+02,PPR|PF01535.16|3.2,PPR|PF01535.16|0.66,PPR|PF01535.16|0.00077,PPR|PF01535.16|0.0016,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|5.8,PPR|PF01535.16|0.0027,PPR|PF01535.16|4.8e-09,PPR|PF01535.16|0.45,PPR|PF01535.16|0.7,PPR|PF01535.16|0.18,PPR|PF01535.16|6.1e+03,DYW_deaminase|PF14432.2|5.9e+03,DYW_deaminase|PF14432.2|2e-36,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|6.3e+03,PPR_1|PF12854.3|22,PPR_1|PF12854.3|0.068,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|0.059,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|39,PPR_1|PF12854.3|0.092,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|5.9e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.55,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|17,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|4.2e+02,PPR_3|PF13812.2|0.031,PPR_3|PF13812.2|0.0004,PPR_3|PF13812.2|0.68,PPR_3|PF13812.2|11,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|1.5e+03 R_Transcript_99449:353-2461(+)
ATGGACCTTCCATTATACGAATATCAGAGTATTTCTGTAGGACAGATCAAGGATACTGTTAGATTAACCTCACCATTCTCTTCTGATTTGAACCCTTTTTTCTTTTCCGGGTCTAGATTTCGGATCAATGAAAGAAAATGGAGAATCCCATTTTCCAAAATTAATTTTTCTTTGCTTGAACAGAATCTAAGGCCCAAACCCAAGCCCAAACCTTCGAAATTCCAAGTGGGTAGAGAAGAAAAACCTAAATCTAAGGAAACCCGGATGCAAAACCAGACCTTTAAGCTTTGTGATCAAATTGAGAAACTTGTTTTTCACAAAAGGTACCAAGAAGCTCTTGAATTGTTTGAGATTTTGGAGATTGAGGGTGGCCATGAAGTTAGTAATAGCACTTATGACGCACTTGTGAATGCTTGTATTAGGTTGAGATCGATTCGAGGGGTTAAAAGAGTTTGTAATTATATGGTTAACAGTGGGTTTGAGCCAGATCAATATATGTGCAATCGGGTTTTGCTTATGCATGTAAAGTGTGGGATGTTGTTTGATGCACGTAAGTCGTTTGATGAAATGCCTCAAAGAAACTTGGTTTCATGGAATACGATGATAGCTGGTTTAGTGGATGTAGGGGCTTTTGTTGAGGCATTTGAGCTGTTTCTTACAATGTGGTCAGAGTTTTTGGATGCTGATTCGCGAACTTTTGCTACCATGATACGAGCAACTGCGGGGTTGGGGTTGATTTATCCTGGAAGGCAGTTGCATTCATGTGTTGTAAAGATGGGTGTTTGTGATGATATTTTTGTTGCGTGTGCATTGATTGACATGTATAGTAAGTGTGGGAGCATCGACGATGCTCAGTTTGTTTTTGATGAGATGCCTGAAAAGACCACTGTTGGTTGGAACACGATTATTGCTGGTTATGCGCTTCATGGTTACAGTGAGGAAGCTTTGAGCATGTATTATGAAATGCAGGATGCTGGAGTGCCGATGGACCATTTTACTTTTTCGATAGTTGTTAGAATATGTGCTAGGTTGGGTTCTCTTGAACACGCAAAACAAGCTCATGCAGGTCTAGTTCGTAATGGTTTTAGCTTGGATACAGTAGCGAACACATCCCTTGTTGACTTGTACAGCAAATGGGGGAGGATAGAGGATGCACAAAATGTTTTCGATAGGATGCCCTACAAGAATCTCATCTCATGGAATGCTTTGATTGCTGGATATGGAAAACATGGACGGGGAGAAGAGGCAGTTGCTTTGTTTGAGCGAATGCTTCATGAAGGAATGAGACCCAATCATGTCACTTTTCTTGCTGTTCTATCTGCCTGTAGTTATTCAGGTCTATCAGATCAGGGTTGGGAAATTTTTGATTCCATGAGTAGGATACATGGTGTCACACCAAGGGCAATGCATTATGCATGCATGATGGAACTATTAGGTCGAGAAGGGCATTTGGATGAAGCTTTGGCTTTGATAAGAGAAGCACCATTTGAGCCTACAGTGAATATGTGGGCAGCTTTACTCACTGCTTGTAGAGTCCACAAGAACCTGGAGCTGGGGAGATTTGCTGCTGAAAAACTCTATGGAATGGGACCCGAAAAGCTTAGTAACTATGTCATTCTTTTGAATATTTATAACAGCATGGGCAAGCTGGAGGAAGCTGCTTCTGTTATCCATTCCTTGAGGCAAAAAGGGCTGAGAATGTTGCCAGCGTGCACTTGGATTGAGATCAAGAAACAATCATATGCTTTTCTTTCTAATGATAGATCGCATCCCCAGACTAACGAAATATACCAAAGACTGGATGATTTGCTTCTTGAGATCTCAAAACATGGTTATGCTCCTGAAAGGAGATCTTTACTCCCAGATGTGGATGAGAAAGAAGGCCGTCTGCTTTTGCATCACAGTGAAAAGTTAGCAGTCGCGTTTGGGCTGATGAATACGCCTGAATATATGCCGCTGCAACTTGTACAAAGCCATCGAATTTGCAATGACTGTCACAAAGCCCTCAAACTGATATCAAAAGTCACAGGACGGGAGATTGTTGTCCGAGATGCTAGCAGATTCCATCGTTTTAACAACGGTAGCTGCTCGTGCAGGGATTATTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99449.p1 GENE.R_Transcript_99449~~R_Transcript_99449.p1 ORF type:complete len:703 (+),score=111.04,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|0.037,PPR_2|PF13041.2|3.4,PPR_2|PF13041.2|6.2e-08,PPR_2|PF13041.2|0.24,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|3.1e-12,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|3.4,PPR_2|PF13041.2|16,PPR|PF01535.16|1e+02,PPR|PF01535.16|3.2,PPR|PF01535.16|0.66,PPR|PF01535.16|0.00077,PPR|PF01535.16|0.0016,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|5.8,PPR|PF01535.16|0.0027,PPR|PF01535.16|4.8e-09,PPR|PF01535.16|0.45,PPR|PF01535.16|0.7,PPR|PF01535.16|0.18,PPR|PF01535.16|6.1e+03,DYW_deaminase|PF14432.2|5.9e+03,DYW_deaminase|PF14432.2|2e-36,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|6.3e+03,PPR_1|PF12854.3|22,PPR_1|PF12854.3|0.068,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|0.059,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|39,PPR_1|PF12854.3|0.092,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|5.9e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.55,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|17,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|4.2e+02,PPR_3|PF13812.2|0.031,PPR_3|PF13812.2|0.0004,PPR_3|PF13812.2|0.68,PPR_3|PF13812.2|11,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|1.5e+03 R_Transcript_99449:353-2461(+)
MDLPLYEYQSISVGQIKDTVRLTSPFSSDLNPFFFSGSRFRINERKWRIPFSKINFSLLEQNLRPKPKPKPSKFQVGREEKPKSKETRMQNQTFKLCDQIEKLVFHKRYQEALELFEILEIEGGHEVSNSTYDALVNACIRLRSIRGVKRVCNYMVNSGFEPDQYMCNRVLLMHVKCGMLFDARKSFDEMPQRNLVSWNTMIAGLVDVGAFVEAFELFLTMWSEFLDADSRTFATMIRATAGLGLIYPGRQLHSCVVKMGVCDDIFVACALIDMYSKCGSIDDAQFVFDEMPEKTTVGWNTIIAGYALHGYSEEALSMYYEMQDAGVPMDHFTFSIVVRICARLGSLEHAKQAHAGLVRNGFSLDTVANTSLVDLYSKWGRIEDAQNVFDRMPYKNLISWNALIAGYGKHGRGEEAVALFERMLHEGMRPNHVTFLAVLSACSYSGLSDQGWEIFDSMSRIHGVTPRAMHYACMMELLGREGHLDEALALIREAPFEPTVNMWAALLTACRVHKNLELGRFAAEKLYGMGPEKLSNYVILLNIYNSMGKLEEAASVIHSLRQKGLRMLPACTWIEIKKQSYAFLSNDRSHPQTNEIYQRLDDLLLEISKHGYAPERRSLLPDVDEKEGRLLLHHSEKLAVAFGLMNTPEYMPLQLVQSHRICNDCHKALKLISKVTGREIVVRDASRFHRFNNGSCSCRDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST