Transcript Information: R_Transcript_99461.p1


Annotated TAIR IDAT1G05780.1
Annotated Gene NameVacuolar ATPase assembly integral membrane protein VMA21-like domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1726761-1728180 | Forward length=106
E-Value6.2E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.82247446496
Replicate 231.596374412876
Replicate 324.463506170648
Condition 2: 8 Hour
Replicate 110.697707986661
Replicate 215.196715814398
Replicate 315.684401409849
Condition 3: 24 Hour
Replicate 120.728893904626
Replicate 222.055258890577
Replicate 325.28773648292


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99461.p1 GENE.R_Transcript_99461~~R_Transcript_99461.p1 ORF type:complete len:103 (+),score=21.94,VMA21|PF09446.6|3.1e-18 R_Transcript_99461:195-503(+)
ATGGCAACAATGGCTGAAGTGAGCAGAAAGTTCTTTGTGGCCTCAATGTTTCTGTGGATACTTCCTATGGCAATCTTATATGGGTTTCAGCATGACTGGTTTCCTGGTTTCTCGCACATATCACCTTACTCTCAGACACTGTTGAGTGGATTCCTTGCTGTTATATCAGTTAATATAATGTTAGCATTCTACATCTGCATGGCAATGAGAGAGCCTTCTGAAAAACACCAGCCAGATCCTGCATTTGTTGCCAAGGCTAAGGCAAGCATAAAGCAGTCTAAACCAGGTGCTGCTGATAAACAGGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99461.p1 GENE.R_Transcript_99461~~R_Transcript_99461.p1 ORF type:complete len:103 (+),score=21.94,VMA21|PF09446.6|3.1e-18 R_Transcript_99461:195-503(+)
MATMAEVSRKFFVASMFLWILPMAILYGFQHDWFPGFSHISPYSQTLLSGFLAVISVNIMLAFYICMAMREPSEKHQPDPAFVAKAKASIKQSKPGAADKQD*

Click here to download the sequence:
Link to NCBI Protein BLAST