Transcript Information: R_Transcript_99490.p1


Annotated TAIR IDAT5G53500.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21726167-21728524 | Reverse length=654
E-Value1E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5946750239052
Replicate 21.5620879959609
Replicate 32.1553385484345
Condition 2: 8 Hour
Replicate 11.9288646347939
Replicate 22.2507670999881
Replicate 33.9321869834099
Condition 3: 24 Hour
Replicate 12.8634464157093
Replicate 21.7856555338104
Replicate 33.6399683943199


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99490.p1 GENE.R_Transcript_99490~~R_Transcript_99490.p1 ORF type:5prime_partial len:457 (+),score=81.04,WD40|PF00400.28|5.5e-05,WD40|PF00400.28|9.9e-06,WD40|PF00400.28|0.0003,WD40|PF00400.28|1.2e+03 R_Transcript_99490:2-1372(+)
GGAGATTTGCGCTCTTCTTCGAGTCAATCGTCTATATCTCATTGCTCAATTGACACTCGAGAGTTGTTGGACATGGCATTGGGGGAGAATTTGGTTCGTAGGATCAGGAACTTGGATGATGGGTCGGAGTTCATCGTTGATGAACTGGGGCAGGATGGGCTATTGAGAAGACTTCGAGAAGTGGGGTCTAATCGGCTGGTCAGTGGGGAGGAATTCGAGAAAATCCTTGGTATATCTCCACTGGTACAAAGGGTGATGAGGAGAGATGTTCGACTTGGTCAAGCATCTAATAATAATGTAGACAGCAAAAAAAGAGTGAAGAAAGGATGGCTTAAAAGATTAGGTGTAGTCGCATGTGTTGCTGATACACAGGCAGGAGTAAACAGGTTAGAGGTTGATGGTTCCATTCGAGTTCCAAATGGTGGAACTCACAATGTTAGGGTTCGTGCTTACAGGAAACGGTCAAAGGAGTTCTCGGCTCTTTATATGGGGCAAGATATCGTCGGACATAAGGGCGCAATCCTCACAATGAAGTTCAGTCCTGATGGTCAGCTCCTAGCAAGTGCTGGTGAAGATGGAATAGTCCGCGTGTGGCAGGTGATTGAGTCAGAGAGGTCAGATTCAGTTCAAATCCGTGATGTGGAACCTTCACACGTCTATTTCACATTAAACCATCTTGGGGAACTGGTACCTGTCAATGTTAATAAAGAGAAAAAGAGGAGGCTAATGATCTTGAGAAAATCGTGTGAATCTGCCTGTGTCATCTTCCCTGGGAAGGTTTTCCGACTGGCAGAAAAGCCTCTTCATGAGTTCCAGGGTCATCAGGGTGAAGTATTGGATCTTTCATGGTCAAACAATAAGCTTCTTCTGTCATCCTCTGTTGACAAAACTGTCCGTTTGTGGAGAGTGGGATGTGAACAGTGTCTGAAAGTGGTTTCTCACAATACTTACGTCACATGCATTCACTCCAACCCTGCTGATGAAAATCACTTCATCAGTGGTTCCATAGATGGTAAAATTCGTATTTGGGCAATTGCTGGATGTGAAGTTATTGATTGGACAGATATAAAAGAAATAGTTACAGCAGTTTGTTATCAGCCTGGTGGAAAGGGGGCAATTGTTGGCTCGATTGCTGGTGACTGTTTCTTATACGACACTTCAGATAATCGGCTGCAACTGACAGAAAAAACATCTTTACATGGTAAGAAGAAGGCGCCTCTTAGAAGAATAACTGGCTTTCAGTTTTCTCCTGGCGACCCAAGCAAGCTGATGGTTACAACTGCTGATTCTCAGGTTCGAATACTTAAAGGGGTTGATGTGATCTGTAAATATAAAGGTAGGTCGTTCATACCTCTGTTTAAAGGTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99490.p1 GENE.R_Transcript_99490~~R_Transcript_99490.p1 ORF type:5prime_partial len:457 (+),score=81.04,WD40|PF00400.28|5.5e-05,WD40|PF00400.28|9.9e-06,WD40|PF00400.28|0.0003,WD40|PF00400.28|1.2e+03 R_Transcript_99490:2-1372(+)
GDLRSSSSQSSISHCSIDTRELLDMALGENLVRRIRNLDDGSEFIVDELGQDGLLRRLREVGSNRLVSGEEFEKILGISPLVQRVMRRDVRLGQASNNNVDSKKRVKKGWLKRLGVVACVADTQAGVNRLEVDGSIRVPNGGTHNVRVRAYRKRSKEFSALYMGQDIVGHKGAILTMKFSPDGQLLASAGEDGIVRVWQVIESERSDSVQIRDVEPSHVYFTLNHLGELVPVNVNKEKKRRLMILRKSCESACVIFPGKVFRLAEKPLHEFQGHQGEVLDLSWSNNKLLLSSSVDKTVRLWRVGCEQCLKVVSHNTYVTCIHSNPADENHFISGSIDGKIRIWAIAGCEVIDWTDIKEIVTAVCYQPGGKGAIVGSIAGDCFLYDTSDNRLQLTEKTSLHGKKKAPLRRITGFQFSPGDPSKLMVTTADSQVRILKGVDVICKYKGRSFIPLFKGC*

Click here to download the sequence:
Link to NCBI Protein BLAST