Transcript Information: R_Transcript_99491.p1


Annotated TAIR IDAT5G24320.2
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8284858-8287651 | Reverse length=698
E-Value5E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.414540750761
Replicate 215.589670135324
Replicate 319.613667894336
Condition 2: 8 Hour
Replicate 116.32390996483
Replicate 221.230473912405
Replicate 324.517578326115
Condition 3: 24 Hour
Replicate 121.362003881703
Replicate 216.65468206903
Replicate 320.124240328237


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99491.p1 GENE.R_Transcript_99491~~R_Transcript_99491.p1 ORF type:5prime_partial len:633 (+),score=110.07,WD40|PF00400.28|8.3e-05,WD40|PF00400.28|1.5e-05,WD40|PF00400.28|3.3e-05,WD40|PF00400.28|1.9e+03,WD40|PF00400.28|0.79,WD40|PF00400.28|16,Ge1_WD40|PF16529.1|0.00016,Ge1_WD40|PF16529.1|1.5e+03,Ge1_WD40|PF16529.1|14,Ge1_WD40|PF16529.1|2e+02 R_Transcript_99491:1-1899(+)
CAATCGTCTATATCTCGTTGCTCAAGTGACACTCAAGAGTTGTTGGACATGGCATTGGAGGAGAATTTGGTTTGTAGGATCAGGAACTTGGATGATGGGTCGGAGTTCATCGTTGATGAACTGGGGCAGGATGGGCTATTGAGAAGACTTCGAGAAGTGGGGTCTAATCGGCTGGTCAGTGGGGAGGAATTCGAGAAAATCCTTGGTATATCTCCACTGGTACAAAGGGTGATGAGGAGAGATGTTCGACTTGGTCAAGCATCTAATAATAATGTAGACAGCAAAAAAAGAGTGAAGAAAGGATGGCTTAAAAGATTAGGTGTAGTCGCATGTGTTGCTGATACACAGGCAGGAGTAAACAGGTTAGAGGTTGATGGTTCCATTCGAGTTCCAAATGGTGGAACTCACAATGTTAGGGTTCGTGCTTACAGGAAACGGTCAAAGGAGTTCTCGGCTCTTTATATGGGGCAAGATATCGTCGGACATAAGGGCGCAATCCTCACAATGAAGTTCAGTCCTGATGGTCAGCTCCTAGCAAGTGCTGGTGAAGATGGAATAGTCCGCGTGTGGCAGGTGATTGAGTCAGAGAGGTCAGATTCAGTTCAAATCCGTGATGTGGAACCTTCACACGTCTATTTCACATTAAACCATCTTGGGGAACTGGTACCTGTCAATGTTAATAAAGAGAAAAAGGGGAGGCTGAAGAACTTGAGAAAATCGTCTGAATCCGCCTGTGTCATCTTCCCTCGGAAGGTTTTCCGACTGGCAGAAAAGCCTCTTCATGAGTTCCAGGGTCATCAGGGTGAAGTATTGGATCTTTCATGGTCAAACAATAAGCTTCTTCTGTCATCCTCTGTTGACAAAACTGTCCGTTTGTGGAGAGTGGGATTTGAAAAGTGTCTGAAAGTGTTTTCTCACAATACTTATGTCACATGCATTCACTTCAACCCTGCTGATGAAAATTACTTCATCAGTGGTTCCATAGATGGTAAAATTCGTATTTGGGCAATTGCTGGATGTGAAGTTATTGATTGGACAGATATAAAAGAAATAGTTACAGCAGTTTGTTATCAGCCTGGTGGAAAGGGGGCAATTGTTGGCTCGATTGCTGGTGACTGTTTCTTATACGACACTTCAGATAATCGGCTGCAACTGACAGAAAAAACATCTTTACATGGTAAGAAGAAGGCGCCTCTTAGAAGAATAACTGGCTTTCAGTTTTCTCCTGGCGACCCAAGCAAGCTGATGGTTACAACTGCTGATTCTCAGGTTCGAATACTTAAAGGGGTTGATGTGATCTGTAAATATAAAGGTCTGCGGAATGCGGGGAGCCAGATATCAGCATCATTCACTTCAGACGGGAAGCATATTGTCTCAGCCAGTGAAGATTCGTTTGTTTACATTTGGGACTGTGCTAGAACAGACAAACCTGTTTCCTCCCATGTTCATAGCAACTGGTCATCTGAGAGATTTTTCTCAAACAACGCCTCTGTTGCACTTCCTTGGTGTGGAACAACATGTGGGAATGTGTTACCATCTCTCTCGGATACATCTTCATCACTCGGACACTCAGGGATAATGGTTAGATATCCACCAGAGCAGAATTCCTCGGGTGAGAATCCCCACCATAGACCGCCATTATTCTCAACAGATGCAATTTCTCTGGGATTTTCAGATCCATTCTCCAGAGGGGTTGCAACTTGGCCAGAGGAGAAGCTAACAAGCTCAAACTCCCTAACCGTGTCATCTACTACATGCAAATCTGAGTACAAGTTTTTGAAGACAACTTGCCAAAACATGGCGGGTTCTCCTCATGCATGGGGTTTAGTAATTGTAACAGCCGGCTGGGATGGTCGGATCAGGGTCTTCCAGAACTATGGATTACCGGTTCGTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99491.p1 GENE.R_Transcript_99491~~R_Transcript_99491.p1 ORF type:5prime_partial len:633 (+),score=110.07,WD40|PF00400.28|8.3e-05,WD40|PF00400.28|1.5e-05,WD40|PF00400.28|3.3e-05,WD40|PF00400.28|1.9e+03,WD40|PF00400.28|0.79,WD40|PF00400.28|16,Ge1_WD40|PF16529.1|0.00016,Ge1_WD40|PF16529.1|1.5e+03,Ge1_WD40|PF16529.1|14,Ge1_WD40|PF16529.1|2e+02 R_Transcript_99491:1-1899(+)
QSSISRCSSDTQELLDMALEENLVCRIRNLDDGSEFIVDELGQDGLLRRLREVGSNRLVSGEEFEKILGISPLVQRVMRRDVRLGQASNNNVDSKKRVKKGWLKRLGVVACVADTQAGVNRLEVDGSIRVPNGGTHNVRVRAYRKRSKEFSALYMGQDIVGHKGAILTMKFSPDGQLLASAGEDGIVRVWQVIESERSDSVQIRDVEPSHVYFTLNHLGELVPVNVNKEKKGRLKNLRKSSESACVIFPRKVFRLAEKPLHEFQGHQGEVLDLSWSNNKLLLSSSVDKTVRLWRVGFEKCLKVFSHNTYVTCIHFNPADENYFISGSIDGKIRIWAIAGCEVIDWTDIKEIVTAVCYQPGGKGAIVGSIAGDCFLYDTSDNRLQLTEKTSLHGKKKAPLRRITGFQFSPGDPSKLMVTTADSQVRILKGVDVICKYKGLRNAGSQISASFTSDGKHIVSASEDSFVYIWDCARTDKPVSSHVHSNWSSERFFSNNASVALPWCGTTCGNVLPSLSDTSSSLGHSGIMVRYPPEQNSSGENPHHRPPLFSTDAISLGFSDPFSRGVATWPEEKLTSSNSLTVSSTTCKSEYKFLKTTCQNMAGSPHAWGLVIVTAGWDGRIRVFQNYGLPVRL*

Click here to download the sequence:
Link to NCBI Protein BLAST