Transcript Information: R_Transcript_99578.p1


Annotated TAIR IDAT5G50230.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20448632-20450855 | Reverse length=509
E-Value4.2E-284
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.859715584922
Replicate 212.614215709987
Replicate 312.506809763848
Condition 2: 8 Hour
Replicate 112.506478965227
Replicate 215.709504072379
Replicate 316.624175675814
Condition 3: 24 Hour
Replicate 116.039016008396
Replicate 213.207258748565
Replicate 315.291410123723


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99578.p1 GENE.R_Transcript_99578~~R_Transcript_99578.p1 ORF type:complete len:511 (+),score=106.89,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.016,WD40|PF00400.28|14,WD40|PF00400.28|0.0081,WD40|PF00400.28|0.023,WD40|PF00400.28|1.4,WD40|PF00400.28|0.0044,WD40|PF00400.28|10,ATG16|PF08614.7|4e-18,Ge1_WD40|PF16529.1|1.8e+03,Ge1_WD40|PF16529.1|3.7e-05,Ge1_WD40|PF16529.1|39,eIF2A|PF08662.7|0.00026,eIF2A|PF08662.7|81 R_Transcript_99578:247-1779(+)
ATGTCAGAAGAAGAAGAGATTGGCATAGAAGCAATAAAGCAGGCAATTAAGGCTTTGAGGAAACGACATTTGGTTGAAGAAGCTGCACATAGTCCTGCCATTACTGCCATTTCCAAACCTCTTGTTTTTCAGGGATCAGAATGGAAAGAAAAAGCCGAAAATCTGGAACTTGAACTTCAGCAGTGTTACAAAGCTCAATCTCGACTATCTGAGCAGCTTGTGGTTGAAGTTGCTGAGTGCCGAGCTGCAAAAACTTTGATTCAAGAGAAAGAAACGGCAATAGACAACCTGCAGGAAGAGGTTGCTCACCTTAGCAATGAGTGCTCGGAGTTAAAAGCACTTTTAGATGAGAAGACCAAAGCTTTAGAATTGGTTACAAGTGAAAACGAAGAACTGAAGAGACAACTTGAGGAGACGACCTTGAAAGCAAAAAATGCAGAAGCTGAAAATAAAATGTTAGTCGATCGCTGGATGCTGCAGAAGATGCAAGATGCTGAGCGCATTAATGAGGCTAATGCTCTCTATGAAGACATGCTTGGTCAACTTAGGGCCAGTGGCATACAACAACTTGCTCGCCAGCAAGTTGATGGTGTGGTTCGTCAAAGTGAAGAAGGTGCGGAGTATTTTGTCGAATCAAGCATCCCCAAAACTTGCACCAACAGAATTCATGCTCATGATGGTGGTTGTGCTTCCATATTGTTCGAGTATAATTCCAACAAATTGATCAGTGGAGGGCAGGACCGTTCGATTAAGATGTGGGATACAAGTACAGGATCATTAAGCCGTACTCTCTATGGCTGCCTGGGTTCTGTTCTTGATCTTACTATCACCCATGACAATAAAACCATTATAGCAGCAAGTAGCTCGAACAACTTGTATGTTTGGGATGTTAATTCTGGTCGAATCCGCCATACACTTACCGGACACACTGATAAAGTATGTGCGGTTGATGTGAGTAAGGTCTCCAGTCGCCACGCTGTCAGTGCAGCTTATGATCGAACTATAAAAGCTTGGGATTTGCAGAAAGGTTACTGCTCAAATACAATAATCTTCCCGAGCAACTGCAATTCTGTTTGTTTTAGCGTGGATGGAAGAACAATATGTTCGGGTCATGTTGATGGGAACCTCCGGCTATGGGATATACAGACAGGAAAGCTACTCAGTGAAGTAGCAGCTCATTCACTTGCAGTGACATCAATCTCTTTGTCCCGAGATGGAAATACAATATTGACGAGCGGGAGAGACAATTTGCATAATCTGTTTGATGTTCGGTCCCTTGAAGTTTGTGGGACATTGAGGGGGAGTGGAAACAGAGTAGCATCTAACTGGAGCAGATCCTGTATCAGTGCTGACGACAACTATGTTGCTGCTGGATCTGCTGACGGATCTGTACATATTTGGTCGATAAAGAAGGGAGATATAGTTAGTACACTCAAGGAACATGGTGCTCCTGTTTTGTGCTGTGCGTGGAGTGATCTTGGGAAGCCTTTAGCTACATCTGACAAGAATGGTGTTATTTGCACCTGGACGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99578.p1 GENE.R_Transcript_99578~~R_Transcript_99578.p1 ORF type:complete len:511 (+),score=106.89,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.016,WD40|PF00400.28|14,WD40|PF00400.28|0.0081,WD40|PF00400.28|0.023,WD40|PF00400.28|1.4,WD40|PF00400.28|0.0044,WD40|PF00400.28|10,ATG16|PF08614.7|4e-18,Ge1_WD40|PF16529.1|1.8e+03,Ge1_WD40|PF16529.1|3.7e-05,Ge1_WD40|PF16529.1|39,eIF2A|PF08662.7|0.00026,eIF2A|PF08662.7|81 R_Transcript_99578:247-1779(+)
MSEEEEIGIEAIKQAIKALRKRHLVEEAAHSPAITAISKPLVFQGSEWKEKAENLELELQQCYKAQSRLSEQLVVEVAECRAAKTLIQEKETAIDNLQEEVAHLSNECSELKALLDEKTKALELVTSENEELKRQLEETTLKAKNAEAENKMLVDRWMLQKMQDAERINEANALYEDMLGQLRASGIQQLARQQVDGVVRQSEEGAEYFVESSIPKTCTNRIHAHDGGCASILFEYNSNKLISGGQDRSIKMWDTSTGSLSRTLYGCLGSVLDLTITHDNKTIIAASSSNNLYVWDVNSGRIRHTLTGHTDKVCAVDVSKVSSRHAVSAAYDRTIKAWDLQKGYCSNTIIFPSNCNSVCFSVDGRTICSGHVDGNLRLWDIQTGKLLSEVAAHSLAVTSISLSRDGNTILTSGRDNLHNLFDVRSLEVCGTLRGSGNRVASNWSRSCISADDNYVAAGSADGSVHIWSIKKGDIVSTLKEHGAPVLCCAWSDLGKPLATSDKNGVICTWT*

Click here to download the sequence:
Link to NCBI Protein BLAST