Transcript Information: R_Transcript_99619.p1


Annotated TAIR IDAT1G18760.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6471150-6471824 | Reverse length=224
E-Value1.5E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6817480465805
Replicate 26.7285441488523
Replicate 39.1096292370799
Condition 2: 8 Hour
Replicate 17.4686615090053
Replicate 26.5614942854444
Replicate 36.7280101141203
Condition 3: 24 Hour
Replicate 17.1798547700542
Replicate 29.0264766115876
Replicate 35.9155958613236


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99619.p1 GENE.R_Transcript_99619~~R_Transcript_99619.p1 ORF type:complete len:259 (+),score=10.50,zf-RING_2|PF13639.2|6.5e-13,zf-RING_11|PF17123.1|1.4e-09,zf-C3HC4_2|PF13923.2|1.6e-06,zf-rbx1|PF12678.3|1.1e-05,zf-C3HC4|PF00097.21|1.5e-05 R_Transcript_99619:181-957(+)
ATGAATCTCAGATCTTTGTTTTATCAATGCGTATCTAGCAAGCAAATCCGAGTATTTAACAGCGAAATCATCGTTTTGGCCGGAAAAAGTTTCACGATGAGATTACTGGCAGGTAATATCGTGTACAACTTCACCGTCACACATGACGAAACCCTAGATTCCACTACCGCAAACGAATATCAAATCACCGTACACTATCGCAAGTTCAATGGCGGCGGTGGTTCTTCATCACCGGAGACAGAGCTTCAACGATCGATCCGATTCTCTCGCACCGGAGATCGATCTTCTTCGTCGGCGTCAATAATGGCGGAGGTGCTTCAAGAATTCGAGGTTCCGGAACAAGTTCAAGGAGACATGGTAGACCACTTGAAGTTCTACCTCGAGAGGATATCGAGGCGAAACCTTCGCCGAGAAGGAATCATTCGTGTCAACGTCACGGTCGACGCGAGGGTGATGTCATCGGATAGGGCTGCGGAGGTGCAGTGGAGGATGATGAGGAGAGAGAATCGTCAAAGTCAGGCGGTGAGGGTGGTGCCGGAGACGACGATGGCGACATCATCGCCGGCGAAGAAGTCGGCGGTGGAGGCGCTGGTGAGGGAAAGTGTGAGGAGTGAAGGAGAAGAGGAGAGAGAATGTTCGATTTGTTTGGAAGGGTTTGGGTTAGGGGTTGAGGTGATTAGGATGCCCTGCTTGCATGTCTACCATAAGGAGTGCATCTTAAGGTGGCTTGAAAGAACTCATTTTTGCCCCTTTTGTAGATTCAAGCTACCTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99619.p1 GENE.R_Transcript_99619~~R_Transcript_99619.p1 ORF type:complete len:259 (+),score=10.50,zf-RING_2|PF13639.2|6.5e-13,zf-RING_11|PF17123.1|1.4e-09,zf-C3HC4_2|PF13923.2|1.6e-06,zf-rbx1|PF12678.3|1.1e-05,zf-C3HC4|PF00097.21|1.5e-05 R_Transcript_99619:181-957(+)
MNLRSLFYQCVSSKQIRVFNSEIIVLAGKSFTMRLLAGNIVYNFTVTHDETLDSTTANEYQITVHYRKFNGGGGSSSPETELQRSIRFSRTGDRSSSSASIMAEVLQEFEVPEQVQGDMVDHLKFYLERISRRNLRREGIIRVNVTVDARVMSSDRAAEVQWRMMRRENRQSQAVRVVPETTMATSSPAKKSAVEALVRESVRSEGEEERECSICLEGFGLGVEVIRMPCLHVYHKECILRWLERTHFCPFCRFKLPC*

Click here to download the sequence:
Link to NCBI Protein BLAST