Transcript Information: R_Transcript_99654.p1


Annotated TAIR IDAT3G13330.1
Annotated Gene Nameproteasome activating protein 200
Annotated Gene Symbol(s)PA200
Annotation TypeOrtholog
Chromosome Positionchr3:4319804-4330061 | Reverse length=1816
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.30334785687
Replicate 29.7603167402824
Replicate 310.901933775701
Condition 2: 8 Hour
Replicate 117.114359395889
Replicate 221.630781105917
Replicate 330.075219810425
Condition 3: 24 Hour
Replicate 116.656162299679
Replicate 214.194945262724
Replicate 316.061481137148


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99654.p1 GENE.R_Transcript_99654~~R_Transcript_99654.p1 ORF type:complete len:1807 (+),score=352.18,BLM10_mid|PF16507.1|9.6e-29,BLM10_mid|PF16507.1|1.6e-23,DUF3437|PF11919.4|3.9e-29 R_Transcript_99654:286-5706(+)
ATGCATCTATACAATGCATGGCTTCCACCTCCAATCGCAGAGGAAAGCAAGAAAGAGAAGGAAGCATTCCGTCGAGTTTTGAATTCCGTTAAGGATTCCTATCAACCTGATGATCCTGATTCTGTCTACTCTACTCTCAAATGGATTTCCGTCCTCGACCTTTTCATAAAGGCAAAAAGTGAGTTATGCCTTGGGGATGTGGGTGAGCTTGTTGAAATAGGATTGGATATCTTTCATGCATCCTGCTACAAACTTCATGCACAGGTTAGATGGGGCAATATTCTTGTTAAAATCATAAACAAGTACAGAAAGAAGTTATCCCTCACAGTTCAGTGGCGGCCGCTGTATGAAACCTTGATCCGTACACATTTCAAGAGGAACACAGGCCCAGAAGGGTGGAGAATTAAGCAGAGACACTTTGAGACTGTCACTTCCCTAGTTCGAGCTTGTCGGAGGTTCTTTCCTCAGGGTTCAGCTCTGGAAATCTGGTCTGAGTTTGGATGCCGCTTGGAAAATCCATGGCATAATTCCTCCTTTGAAGGTTCTGGGTTTATCAGACTCTTTCTTCCCACAAATTTGGAGAACAAAGAATTCTTCTCTCAAGATCTCATTGAAAAGTTCGTAGAAGTATGGAGTTCAATTCCAAATTGTCCATTTTGGAATAGTCAATGGTCTGCTGTTCTTGCCCGTGCTATAAAGAACTATGACACTATCACTTGGGAGCCTTTTTTACCTATTCTTTTTGCCAAGTATTTGAACATGTTTGAGGTTCCTGTGGCCAGTGGTGCTAGCTCTTGCCCTTACTCTGTGGACGTTCCTCGAAATACAAGGTTCCTATTTTCAAACAAGACATCCACTCCATCGAAGGCCATTGCAAAGTCTATTGTGTATTTACTTAGACCTGGCAGCTCGGCCCAAGACCACCTTGATAAACTGATCAATCTTTTGGAACAATATTATCACCCCTCTAATGGTGGTCGTTGGACGTATTCTTTGGATCGCTTTTTGCTTTTCCTGGTGATTATGTTCCAGAAACGGCTTCAACATGAGCAAGTGATGTCTACTGGCAGTAGGCGGACGGAGTTATGTTTAGGAAAATCAGAGAGGGTTTCGTTCGTCAATATTGTGTTGAAGCTGATTGATCGTGGTCAATACAGCAAGAATGAGCATTTGTCAGAGTCAGTCGCCGCATCTACTTCAATATTATCTTACGTAGAGCCTTCTATGGTCCTTCCCTTTGTAGCCTCTCGATTTCATTTGGCTTCGGAGACGATGACAGCCACCCACCAGTTGAAGACTGCAGTCACATCTGTTGCATACACTGGCCGGTCTTTGTTCTTTACTTCTCTATTATCTTCAGTAGAAAAACCTGATGATTCTGCTGGTTCAACGAACAGTGATCTTTTGGTTATCGCATTATCAAACGCACTGCTGGGCATGGATGCCAATGATCCTCCAAAGACTTTAGCAACAATGCAATTAATTGGTTCCATATTCTCCAATATAGCCAAACTGGAAGATAGTACTGACGAACTGTTGCCAATTTCTGCTATCCGCTTCTCAGAGTGGCTTGATGAGTTCTTTTGCCGCCTCTTCTCATTACTTTTACACTTGGAACCACATAGCGTCACGAGCGAAGGTCTTAGTAGTATGGCCACATCTGGAACTTTCCTCGTAGAAGATGGTCCTTATTACTTCTGCATGCTGGAAATTTTGCTTGGGAGGCTTTCAAAATCACTGTTTGCACAGGCCTTGAAGAAAATTTCCAAGTTTGTCAAAACCAATATTCTTCCAGGGGCAGTTGCAGAGGTTGGGCTTCTTTGCTGTGCATGTGTGCATGCAAACGCTGAAGAGGCTGTTGTTCATCTTGTTGAGCCATTATTGTCATCTGTCGTTTCCTCTATGAAAGGGACACCTAGCGCCGGATTCATAGGAGTTTTAGATTCTTCAGCTTTGGGCAAGGCAAAACCTGCAATCTCTCCAGCGCTAGAAACAGCAATAGACTATCAGTTGAAAGTGTTATCAGTTTGTATCAGTTATGGGGGTCCTCATCTGCTGCGCTGCAGGGATCAGCTTAAAGAAGCTATAAATCTGGCTTTTGATTCACCATCTTGGAAGGTTAATGGAGCTGGTGACCATGTCCTTCGTTCTCTCCTTGGAAGTTTGGTGCTTTATTACCCAATTGGCCAGTACAGGTGTGTTGTGCGTCACCCTGATGCTACTCACTTGGAGCAATGGATCAGCACAAAGGATTGTATAAAAGACGAGTCACTGATGAGCCCAAAATGGCATGTTCCTGTTGAGGAGGAAATCTCATTTGCCAACGAGCTTTTATCCCTTCATTTTCAATCAGCACTTGATGAGCTACTGAAGATATGCCAAGATAAGATTCACACTGACTCGGGAACCGAGAAAGATCACCTTAAGGTGACACTTCTGCGGATTGATTCCTCATTGCAAGGCATATTGTCCTGCTTGCCAGATTTTGCCCCGTCCTTCCCTAATGGTAATGCTGAAGATTTAGTACACAGTTTATTCTTGCTTGCTGGTGCTGCAGGTGCAAGAGTTGGCAGCACTGCAATGCGAGAGAGGGCTGCTGAGATCATACATGCTGCGTGCAGATATTTTCTGGAGGAAAAATCAGATGATAGCATCTTACTGATTCTCATTATCCGTGTTATGGATGCTTTAGTAAATTATGGCAGTCTTGAATATGATGAATGGTCAAATCACAGGCAAGCCTGGAAACTGGAATCTGCTGCTATTGTGGAACCTTCAACAAATTTTATCACATGTTCTCATTCTAAGGGCAAGAGGAGGCCACTGTGGGCGCTAGTAGACAAGGCTTATATGCACAATACATGGAGAGCATCTCAGTCAACCTTTCATTTATATCGTACGAGGGGGGAGGTGTCTCCATCGAGTCATGCAATTCTTCTGATGGATGACCTTCTTGACCTAGCTGTGCATAGATATGAAACTGTTCGCTCGCTTGCTGGTAAGAGCCTCCTGAAGATGATAAAGAGATGGCCATCCATGGTCTCGAGATGCATGCTTGCTGTTACTGAAAATTTGGCAAACTCCAGTGCATCTGAATATGCTGTTCTTGGGTCCTGTGCTATTCTGTCCACCCAAACAGTTCTGAAGCACTTGACAACGGATGCAAAGGCTTTTACGTCATTCATCATTGGAATTCTGAGAAGTTCACACCATGAATCTTTGAAAGCTCAAAAAGCAATTACAGAGCTATTTGTGAAATTCAACATTCTATTTTCTGGAGTACCAAGAAGCATCTTCAGGGCATCAAACATTCAGTCAGATGGTCAAAATTTTGCTCACTTGATTTCGCAGATAGGTTCCATGAGCTTTGATACCAGTGGCCTACATTGGAGGTACAATCTGATGGCTAACAGAGTTTTGCTGTTGCTGGTGATGGCTTCTAGAAGTGATCCACATTCCTCTACTACAATTTTGAGTGAGACTGCGGGTCATTTTTTGAAGAATTTGAAAAGCCAGCTTCCTCAGACAAGAATTCTTGCAATATCAGCCCTCAATACCTTGCTGAAAGAATCACCTCACAAAATAGTGGAGTCTTCCCCCAAAACAGTTGCAGGGAGTGCAAAATCTTCAGTTGAAGGGGCTTTAATTGAAGTTTGTCAAGAAGATGGGTTCTTCAATCAGACTTTCAACAGCCTTTCGAATGTGCATATAATTAGTGATGCAGAAAGCACATCTTCCAGGGGAAGTCATGGGAATTCTTCATTTCAGAGTGTAGCAGATAAGTCAATAACCTTTTTTTACTTTGACTTCACAGCTGCTTGGCCACGAACCCCTAGTTGGATTTCATTGTTCGGAAGTGATACTTTCTACTCAAACTTTGCTCGAATTTTTAAGAGATTAATTCAAGAATGCGGAACTCCTGTGTTACAAGCTCTAAAGAGTGCCCTAGATGAATTTACAAGTGCCAAGGAGAGAGCTAAGCAATGCGTTGCAGCAGAGGCCTTTGCTGGAATATTGCATTCTGATGTTAGTGGTCTTCTTGATGCGTGGGATGAGTGGATAATGGCCAAACTGCAGGACATAATTATGGCACCGTCGGTGGAATCTGTGCCTGAGTGGGCATCTTGCATACGGTATGCTGTGACTGGGAAGGGGAAGCATGGAACAAGGATTCCTCTTTTAAGGCAGAAAATAATGGAGTGTCTTCTTACACCTTTACCACAGACTGTGGCTACTACTGTAGTTGCCAAACGTTATGCTTTTCTAGCAGCTGCATTTATAGAAGTGTCGCCACCAAAAATGCCAGAGGCCGAGCTATTGCTTCACAAGCAACTTCTGAATGAATTGCTGGTTAATATGAGCCACTTATCTGCACAAGTGAGGGAAGCTGTTGGTGTTACGCTTTGTGTGCTATGCTCAAATATTCAGCTCCATGAAGCCATTGCCAGTTGTCATGCAGACCAAACGGGAAGCAGCTGTGTGGCTGATGATCTTGAAGCATTCAGATGGAATCAGCTTTTATTGGAGCAAGCTGCCGAACGCACCATTAGGATCCAAAATACAACTCAGTCTGACCATGTAAACGTACAAACAGATGTAGTTCATGAAAATGGGATAACAAATAATTCTGAGGATGATGTGAAGTGGATGGAAACGTTATTTCATTTTGTTATTGCGTCGCTGAGGTCTGGTAGATCATTATATTTGCTGGAGACAATTGCTGGCATTCTTTACCCTGTGATATCATTGCAGGACACATCAAATAAAGATTTGTCAACATTGGCAAAGGCTTCTTTTGAATTGCTAAAGTGGAATATGTTCAGAGAACCACATCTCCAGAAGGTCGTTGCTGTAGTACTTTCTTCAGCTGATGATTCTAACTGGCGGACTAGGTCTGCTACACTGACATACCTCCGGACATTTATGTACAGGCACACTTTTGTCCTTTCATTTGATGAAAAACGAGAAATCTGGGCTACTGTTGAGAAGTTACTTGTAGACAGCCAAGTCGAGGTAAGAGAGCATGCAGCAGCTGTTCTGGCTGGTCTGATGAAGGGTGGGGATGAAAAACTTGCTGGAGATTTTCGTGATAGGGCATACAAGGAGGCAAATCTTTTCCTCAAAAAAAGAAAACAAAGAAAAGCTGGCTACTCGGTTGCATCGGTTCACGGTGCTGTGCTTGCTCTGGTGGCTTGTGTCTTATCTGTTCCGTATGACATGCCAAGTTGGTTACCAGGGCATGTGACACTATTGGCTCGCTTCGTTGCTGAGCCATCACCTGTGAGATCAACAGTAACAAAAGCTGTTGCAGAGTTTCGAAGAACCCACGCTGATACATGGAATGTTCAAAAAGATCAATTCACCGAAGAACAACTAGAGGTTCTTGCTGACACATCATCTTCATCATCTTATTTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99654.p1 GENE.R_Transcript_99654~~R_Transcript_99654.p1 ORF type:complete len:1807 (+),score=352.18,BLM10_mid|PF16507.1|9.6e-29,BLM10_mid|PF16507.1|1.6e-23,DUF3437|PF11919.4|3.9e-29 R_Transcript_99654:286-5706(+)
MHLYNAWLPPPIAEESKKEKEAFRRVLNSVKDSYQPDDPDSVYSTLKWISVLDLFIKAKSELCLGDVGELVEIGLDIFHASCYKLHAQVRWGNILVKIINKYRKKLSLTVQWRPLYETLIRTHFKRNTGPEGWRIKQRHFETVTSLVRACRRFFPQGSALEIWSEFGCRLENPWHNSSFEGSGFIRLFLPTNLENKEFFSQDLIEKFVEVWSSIPNCPFWNSQWSAVLARAIKNYDTITWEPFLPILFAKYLNMFEVPVASGASSCPYSVDVPRNTRFLFSNKTSTPSKAIAKSIVYLLRPGSSAQDHLDKLINLLEQYYHPSNGGRWTYSLDRFLLFLVIMFQKRLQHEQVMSTGSRRTELCLGKSERVSFVNIVLKLIDRGQYSKNEHLSESVAASTSILSYVEPSMVLPFVASRFHLASETMTATHQLKTAVTSVAYTGRSLFFTSLLSSVEKPDDSAGSTNSDLLVIALSNALLGMDANDPPKTLATMQLIGSIFSNIAKLEDSTDELLPISAIRFSEWLDEFFCRLFSLLLHLEPHSVTSEGLSSMATSGTFLVEDGPYYFCMLEILLGRLSKSLFAQALKKISKFVKTNILPGAVAEVGLLCCACVHANAEEAVVHLVEPLLSSVVSSMKGTPSAGFIGVLDSSALGKAKPAISPALETAIDYQLKVLSVCISYGGPHLLRCRDQLKEAINLAFDSPSWKVNGAGDHVLRSLLGSLVLYYPIGQYRCVVRHPDATHLEQWISTKDCIKDESLMSPKWHVPVEEEISFANELLSLHFQSALDELLKICQDKIHTDSGTEKDHLKVTLLRIDSSLQGILSCLPDFAPSFPNGNAEDLVHSLFLLAGAAGARVGSTAMRERAAEIIHAACRYFLEEKSDDSILLILIIRVMDALVNYGSLEYDEWSNHRQAWKLESAAIVEPSTNFITCSHSKGKRRPLWALVDKAYMHNTWRASQSTFHLYRTRGEVSPSSHAILLMDDLLDLAVHRYETVRSLAGKSLLKMIKRWPSMVSRCMLAVTENLANSSASEYAVLGSCAILSTQTVLKHLTTDAKAFTSFIIGILRSSHHESLKAQKAITELFVKFNILFSGVPRSIFRASNIQSDGQNFAHLISQIGSMSFDTSGLHWRYNLMANRVLLLLVMASRSDPHSSTTILSETAGHFLKNLKSQLPQTRILAISALNTLLKESPHKIVESSPKTVAGSAKSSVEGALIEVCQEDGFFNQTFNSLSNVHIISDAESTSSRGSHGNSSFQSVADKSITFFYFDFTAAWPRTPSWISLFGSDTFYSNFARIFKRLIQECGTPVLQALKSALDEFTSAKERAKQCVAAEAFAGILHSDVSGLLDAWDEWIMAKLQDIIMAPSVESVPEWASCIRYAVTGKGKHGTRIPLLRQKIMECLLTPLPQTVATTVVAKRYAFLAAAFIEVSPPKMPEAELLLHKQLLNELLVNMSHLSAQVREAVGVTLCVLCSNIQLHEAIASCHADQTGSSCVADDLEAFRWNQLLLEQAAERTIRIQNTTQSDHVNVQTDVVHENGITNNSEDDVKWMETLFHFVIASLRSGRSLYLLETIAGILYPVISLQDTSNKDLSTLAKASFELLKWNMFREPHLQKVVAVVLSSADDSNWRTRSATLTYLRTFMYRHTFVLSFDEKREIWATVEKLLVDSQVEVREHAAAVLAGLMKGGDEKLAGDFRDRAYKEANLFLKKRKQRKAGYSVASVHGAVLALVACVLSVPYDMPSWLPGHVTLLARFVAEPSPVRSTVTKAVAEFRRTHADTWNVQKDQFTEEQLEVLADTSSSSSYFA*

Click here to download the sequence:
Link to NCBI Protein BLAST