Transcript Information: R_Transcript_9975.p1


Annotated TAIR IDAT1G51140.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18943802-18945613 | Reverse length=379
E-Value5.6E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6988981281628
Replicate 25.6555691357032
Replicate 38.0983415743973
Condition 2: 8 Hour
Replicate 14.6993074141178
Replicate 24.2914823735609
Replicate 34.3392739193518
Condition 3: 24 Hour
Replicate 16.2612201530102
Replicate 25.3467294280187
Replicate 36.0430699808942


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_9975.p1 GENE.R_Transcript_9975~~R_Transcript_9975.p1 ORF type:5prime_partial len:297 (+),score=76.72,HLH|PF00010.22|5.5e-10 R_Transcript_9975:3-893(+)
GACATACCTGAAAACTCCCCTGTTCAGCAACTATCCCAGTTTATGGTTGGTGTTAAGCAGGAAAGTGAAACTTTTGCACCTCAGCAACAACAGCAGCAGCAGCAGCAGAGTATTTACAGTGGTTCTTCTCAGCAGATGGTTTATCATAACCAATCAAAGCCGCCTTTAGTAAATCAAAACAATTCTGTTTCTTCTTCATTTGGGGCTGCTCAAAATTCAATGGGGATGGATTCTTTGTCATCCCAGATGAAGATTAGAAGAAACAACAATTCTTCTGGTCTTACAAGGCATAGCAGCTCTCCTGCTGGGTTCTTTGCCGACATCCTAAACCTTGATAATGGGCTTATGAGACAGAATTCGGATTTTGAGGCAAAAGCATTCAACATTTCTGGCAACAACAATGAAAGCAATTACATTTCTACTGGTTTTAACAATATGAATTCATGGGATGACTCAATTTTGTCAGAAAAATACTCTTCCTTAGATAGAGGTGCGGGAGAAGATGAAAGGAAGATATTTTCTGAACTTAATGCCTCAGAAAATCAGAGTGGAGATGGCAGAAATCGCCCTCCCCCTTTAGCTCATCACCTCAGTTTACCAAACACATCAGCAGAACTATCAGCTTTGGAGAAACTGTTGCAGTTCCAAGACACTGTGCCTTGTAGGATTAGGGCTAAGAGAGGATGTGCCACTCACCCTAGAAGCATTGCTGAGAGGGTTAGGAGAACTAGGATTAGTGAAAGGATGAGAAAGCTTCAAGACCTAGTACCCAACATGGACAAGCAAACAAACACAGCAGACATGCTAGATTTAGCTGTTGAGTATATCAAAGACCTCCAGAGCCAAGTCAAGAATCTTAATGACAACAGGGCAAAGTGTACCTGCTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_9975.p1 GENE.R_Transcript_9975~~R_Transcript_9975.p1 ORF type:5prime_partial len:297 (+),score=76.72,HLH|PF00010.22|5.5e-10 R_Transcript_9975:3-893(+)
DIPENSPVQQLSQFMVGVKQESETFAPQQQQQQQQQSIYSGSSQQMVYHNQSKPPLVNQNNSVSSSFGAAQNSMGMDSLSSQMKIRRNNNSSGLTRHSSSPAGFFADILNLDNGLMRQNSDFEAKAFNISGNNNESNYISTGFNNMNSWDDSILSEKYSSLDRGAGEDERKIFSELNASENQSGDGRNRPPPLAHHLSLPNTSAELSALEKLLQFQDTVPCRIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQSQVKNLNDNRAKCTCS*

Click here to download the sequence:
Link to NCBI Protein BLAST