Transcript Information: R_Transcript_99785.p1


Annotated TAIR IDAT3G62470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23106600-23108399 | Reverse length=599
E-Value2.8E-236
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0177036724194
Replicate 23.7803557927155
Replicate 34.068593295667
Condition 2: 8 Hour
Replicate 14.4384353736491
Replicate 24.8421374303297
Replicate 36.4700996493593
Condition 3: 24 Hour
Replicate 15.0272570571615
Replicate 24.0246822793024
Replicate 34.8195554115918


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99785.p1 GENE.R_Transcript_99785~~R_Transcript_99785.p1 ORF type:complete len:822 (+),score=151.92,PPR_2|PF13041.2|0.0047,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|6.4e-09,PPR_2|PF13041.2|2.3e-13,PPR_2|PF13041.2|2.5e-14,PPR_2|PF13041.2|5.2e-09,PPR_2|PF13041.2|3.4e-05,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|1.4e-13,PPR_2|PF13041.2|0.00027,PPR_2|PF13041.2|1.6e+04,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.0011,PPR|PF01535.16|9,PPR|PF01535.16|0.19,PPR|PF01535.16|0.00051,PPR|PF01535.16|0.0065,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|7.4e-05,PPR|PF01535.16|0.04,PPR|PF01535.16|1e-05,PPR|PF01535.16|3.1e-05,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|66,PPR_1|PF12854.3|4.4e-05,PPR_1|PF12854.3|5.1e-05,PPR_1|PF12854.3|3.6e-07,PPR_1|PF12854.3|0.0098,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|1.1e-06,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.36,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.43,PPR_3|PF13812.2|0.0051,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.0028,PPR_3|PF13812.2|6.1e+03 R_Transcript_99785:59-2524(+)
ATGTCCTTCAAGTTTGTTCTCCCACTAACCAAACCCACCAAAAAACCTTCAACCCTCAACTTTCTCTCCTCTAATCATCACCATGTCAGCTCCAATCAGACCTCCATATGCTCCACCCACTGTCAGGGACGATTACAATGTCAAAGAGGATTTCCCTTCACAAGACAAAAGCAGCTATTCCTTGACGGTATTCATTTGCCCTTGTGTCTTTTGTTTCCTTCTCATCTTAATTATTGTCTTTATTCTTCTCATTCTCAAGTTCCACTTGATTTGTCACCTCCCTTTACACTCTCTCCTTTCCTCGAAAAAATGCTAGCTTTTCACTTCACTAGTGGTTCTTTTTCTACCAAAAGATTGGATTTCGGGTATAAGTTGATTGCTAGATCAATCCCATATAGTGTTAGTTCTCATGTTTCTGTTAATAGGGTTTCAACTTTGGGATTGCCCACCAAAATTGAGTCTTTCTATCAATTAACCAGGTTGGATTTTACTAGTTCTTCCAAAAGATTAGATTTTGGGTCTAAATTGATTGCTAGATTAACGCCATATAGTGCTAGTTCTGATGTTTTTGTAAATAGGTTTTCAAGTTTGTGTATTCCCACCAAAATTGAATCTTGTTGTCAATTACCCAAGTTGGGTTTTGCTGGTTCTTCCAAAACATCAGATTTTGGGACTTTGAATTCACTATCTAGTGCTAGTAGTTCTGCTGCTTCTGTTAATGGGATTTCAAAAACGGGTTTGCTCACCAAAATTGAATCTTGCCATCAATTACCTAAGTTAGGTTTTGTTAATTCTTCCAAAAGATTAGATTTTGGGCCTTTGAATTCACTTTCTAGTAGGAGTATTTGTAGTTTTAATGTTTGTGTACATGGGTTTTCTATTTTGGGATTGCCCAAGTTGGGTTTTGTCGAAAAGATGATATCTTTGAAGTCTGGAGGTCATTATAGGGTGTTTTCAAGTTGTTGTGAGGATGATGAGAGATTGAGTGATGATGATTATGATGAGGGCAATAGAGGGAAAAATCTAGTTATTTCTCATGAGTCAAGTGCTGATCCTGAGGAAGTTGGTAGGGTAGCTAAGTTGATTGATCAGTTGTTCGCGTTAGATCGAAATATGGAGGCTGTTCTTGATGAGTGTGGCATTAACTTGACCCATGATTTGGTTGTTGATGTATTGCAACGCTTTAAGCATGCTAGGAAGCCTGCATTTCGATTCTTTTGTTGGGCGGCGCAAAGACCGGGGTTTTCACATGATTCTAGGACTTACAATGTGATGTTGACAATCTTGGGGAAGGCCAGGCAGTTTGAGACAATGGGGTCATTGCTTGAAGAAATGGGGAGAAAAGGGGTTATAACCATTGAGAGTTGCATGATCGCAATCAAAGTGTATGCTTGTGGCAAGGAGAGAAAGAAAGCTGTTGGGGTTTTGGATTTAATGAAGAAACATGGGTTCAAAGTAGGGGTTGATACAATCAATTGCTTGCTTGATGCCCTTGCGAGGGAGAAGCTTGCAAAAGAGGCTCAAGCTTTGTATGATAAGTTGAAGAGTCGGTTTACTCCAAATCTCAAGACTTACTCAATTTTGCTTAGTGGTTGGTGTAAAGTGAAGAATCTTATGGAGGCTGGAAGGATATGGAATGAGATGATTGATCAAGGGTTCAAGCCTGATGTTATAACCCACAATATCATGCTTGATGGGCTCTTGAAGGTGAAAAAACGCTCGGATGCAATCAAACTTTTCGAGGTCATGAAGGCCAAGGGGCCATCTCCAAGTGTTCGGAGCTACACCATATTGATAAGGAACCTGTGCAAGCATTCTAAGATGACGGAAGCTGTTGCATATTTTGATGAGATGTTGGGTTCAGGCTGTGACCCTGATGCTGGGGTGTATACTTGTTTGATTACAGGATTTGGCAACCTAAAAAAGATGGATTTGGTGTATAGTTTGCTTCGAGAGATGAAGGAGAAAGGCCATCATCCTGATGGGAAGTTGTATAACGCGTTGATCAAACTGATGACAAACAGGCGAATGCCAGATGATGCAGTTTGCATTTACAAGACCATGATTCAGGATGGAATTCAGCCTACAATACACACTTATAACATGATGATGAAATCCTACTTGTTGGCCGGAAATAGTGAAATGTGTTTTGCCGTTTGGGATGAGATGGTTCAGAGGGGTTGCTGCCCTGACGAGAACTCCTACACTATTCTCATCGGAGGGCTTATAAGACAAGGGAGATCAGAGGAGGCGTGTAAATATGTCGAGGAAATGATCAATAAAGGCATGAGAGTTCCACAACTCGATTTCAACAAGTTTGTCTCTGATTTCTCTAGGATCGGTCGGCCCAACATACTCGAGGAGCTAGCTCGAAAGATGAGGCTGTCTGGTAAATCTGAAGTTTCTGAAATCTTTGCTAGGTGGTCTGAGATGACCCAGAAAAGAAATGTTCAGAAGAGATCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99785.p1 GENE.R_Transcript_99785~~R_Transcript_99785.p1 ORF type:complete len:822 (+),score=151.92,PPR_2|PF13041.2|0.0047,PPR_2|PF13041.2|0.25,PPR_2|PF13041.2|6.4e-09,PPR_2|PF13041.2|2.3e-13,PPR_2|PF13041.2|2.5e-14,PPR_2|PF13041.2|5.2e-09,PPR_2|PF13041.2|3.4e-05,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|1.4e-13,PPR_2|PF13041.2|0.00027,PPR_2|PF13041.2|1.6e+04,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.0011,PPR|PF01535.16|9,PPR|PF01535.16|0.19,PPR|PF01535.16|0.00051,PPR|PF01535.16|0.0065,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|7.4e-05,PPR|PF01535.16|0.04,PPR|PF01535.16|1e-05,PPR|PF01535.16|3.1e-05,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|66,PPR_1|PF12854.3|4.4e-05,PPR_1|PF12854.3|5.1e-05,PPR_1|PF12854.3|3.6e-07,PPR_1|PF12854.3|0.0098,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|1.1e-06,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.36,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.43,PPR_3|PF13812.2|0.0051,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.0028,PPR_3|PF13812.2|6.1e+03 R_Transcript_99785:59-2524(+)
MSFKFVLPLTKPTKKPSTLNFLSSNHHHVSSNQTSICSTHCQGRLQCQRGFPFTRQKQLFLDGIHLPLCLLFPSHLNYCLYSSHSQVPLDLSPPFTLSPFLEKMLAFHFTSGSFSTKRLDFGYKLIARSIPYSVSSHVSVNRVSTLGLPTKIESFYQLTRLDFTSSSKRLDFGSKLIARLTPYSASSDVFVNRFSSLCIPTKIESCCQLPKLGFAGSSKTSDFGTLNSLSSASSSAASVNGISKTGLLTKIESCHQLPKLGFVNSSKRLDFGPLNSLSSRSICSFNVCVHGFSILGLPKLGFVEKMISLKSGGHYRVFSSCCEDDERLSDDDYDEGNRGKNLVISHESSADPEEVGRVAKLIDQLFALDRNMEAVLDECGINLTHDLVVDVLQRFKHARKPAFRFFCWAAQRPGFSHDSRTYNVMLTILGKARQFETMGSLLEEMGRKGVITIESCMIAIKVYACGKERKKAVGVLDLMKKHGFKVGVDTINCLLDALAREKLAKEAQALYDKLKSRFTPNLKTYSILLSGWCKVKNLMEAGRIWNEMIDQGFKPDVITHNIMLDGLLKVKKRSDAIKLFEVMKAKGPSPSVRSYTILIRNLCKHSKMTEAVAYFDEMLGSGCDPDAGVYTCLITGFGNLKKMDLVYSLLREMKEKGHHPDGKLYNALIKLMTNRRMPDDAVCIYKTMIQDGIQPTIHTYNMMMKSYLLAGNSEMCFAVWDEMVQRGCCPDENSYTILIGGLIRQGRSEEACKYVEEMINKGMRVPQLDFNKFVSDFSRIGRPNILEELARKMRLSGKSEVSEIFARWSEMTQKRNVQKRS*

Click here to download the sequence:
Link to NCBI Protein BLAST