Transcript Information: R_Transcript_99846.p1


Annotated TAIR IDAT2G21090.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9045695-9047488 | Reverse length=597
E-Value4.4E-251
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1522987892838
Replicate 22.7826422238467
Replicate 33.1541118893153
Condition 2: 8 Hour
Replicate 14.2565789323094
Replicate 24.464478990667
Replicate 35.9359828190594
Condition 3: 24 Hour
Replicate 15.1368587600715
Replicate 25.4663636492997
Replicate 35.4248355850486


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99846.p1 GENE.R_Transcript_99846~~R_Transcript_99846.p1 ORF type:complete len:581 (+),score=91.98,PPR_2|PF13041.2|8.4,PPR_2|PF13041.2|0.0031,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|6.8e-06,PPR_2|PF13041.2|0.042,PPR_2|PF13041.2|8.2e-05,PPR_2|PF13041.2|2.8e-08,PPR_2|PF13041.2|6.8,PPR_2|PF13041.2|1.2e-12,PPR_2|PF13041.2|0.019,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|0.026,PPR|PF01535.16|4.3e-05,PPR|PF01535.16|4.1e-06,PPR|PF01535.16|0.0023,PPR|PF01535.16|7.3e-07,PPR|PF01535.16|4.1e-06,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|13,PPR|PF01535.16|8.8e-06,PPR|PF01535.16|0.0026,PPR|PF01535.16|18,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|6.5e+02,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|6.1,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.0041,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.9,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|3.6e+03,PPR_3|PF13812.2|0.075,PPR_3|PF13812.2|0.0065,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|5.7e+02,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.0074,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|81,PPR_3|PF13812.2|2e+02 R_Transcript_99846:198-1940(+)
ATGCGATCTTTTTCACTTCCAAATCAAGCCCTTTCTCATTTCCAAGCCAAACCCAGAAACCCCAGAAAAAACCCACCTTGTATAGTTCAAAGGGTAGTCGATCTCTGCTACAAAGGTCAGCTAAGAGAAGCAGTTGATTCACTTCACATATTAGCTCAAAAAGGCTTTCGTTTGGACTCTCAAACGGTTGCTTTTTTATTGGGTCAGTGTGCAAAGACCAGGTCACTTAAAGAGGGCAAATGGGTACATCTTCATTTGAAGCTTACTGGTATGAAACACCCCAATACTTTCGTATCAAATCATTTAATGCGTATGTACTTTGAATGCGGTGATCACGTTCACGCACGTAAGTTGTTTGATAAAATGTCTGTGAGAAACTTGTACAGTTGGAATAATGCCCTTTCTGGGTATGCTAAGTTAGGCATGCTTGGGGCTGCTAGAAGGTTGTTTGATAAAATGGGTGAAAGGGATGTGGTGTCATGGAATACTATGGTGATTGGGTATGCACAGAGTGGAGATTATAGTGAGGCATTAAAGTTTTATAGGGAGTTTAGAACGGCTTCTGTTGGATATAATGCATTTAGTTTTGCTGGTGTTTTGACTGCTGCTTCGAAATTGAGGGATCCAATATTGACTAGGCAGGTGCACTGTCAAGTGTTGATTGCTGGGTTTCTTAATAATGTGGTCCTATCGAGCTCAATTGTAGATGCTTATGCTAAATGCTGTGAGATGGACAGTGCAAGGAAGTTGTTTGAGGAGATGTGGGTCAGGGATATTCCAGCTTGGACTGCATTGATTTCAGGTTATGCCAAATGGGGAGATATGAAATCGGCACAAGAATTGTTTGATGTGATGCCTGAGAAAAACTTAGTGTCATGGACTGCTATGGTTTCTGGTTATGCTCGCAACAATTTAGGGCATTTTGCACTTGAAATGTTTAGGAAAATGATGATACTTGGCATTAGACCCAGTCAGTTCACTTTCAGTAGCTGCCTTTGTGCTTGCAGTAGCTTAGCTTCATTAAAGCATGGTAAACAGATCCATGCTTATATGCTACGAACTGGTTTCAGGCCCAATACCATGGTCATGAGCTCTCTCATTGATATGTATTCAAAATGCGGAAGTTTAAAGCTCAGTCAGCTGGTTTTTCACTTGCTAGGTAATAAGCACGATGTTATGATGTGGAACCCCATGATAACTGCCTTAGCTCAGCATGGTTACGGTGAAGAGGCAATCAGAGTATTCAATGACATGATTCTTTTTGGGTTAAAACCAAATAGGGTGACCTTTGTTATCCTTCTCAGTGCATGTAGTCATTCAGGTCTTGTAGATCAGGGACTATCATTTTTCAAATCTATGTCAGAAGATCATGGCATTCCTCCTGATGAAGAGCATTATGCATGCCTGGTTGATCTTTTAGGTAGAGCTGGATGTATTGATGAATTGATGAAACAGCTAGAAATGATGCCCTGTAAAAACGATGATAGGATATGGAATGCCCTGGTTGGTGTTTGTCAAATTCATGAGAATGCTAAGTTAGGGAAGCAGGCTGCAGAACGTCTTCTTGAACTGGAACCACAATCTTCTGCACCCTATTTACTACTTTCAAGCATATATGCTGCATCTGGCAGCTGGGAGAATGTGGAAAGAATGAGACATATCATGGATCAGAAATCTGTGAGAAAGTCGCAAGCGAGTAGCTGGGTTGAAACCAACCACAAGGCTCATGCTTTAAGTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99846.p1 GENE.R_Transcript_99846~~R_Transcript_99846.p1 ORF type:complete len:581 (+),score=91.98,PPR_2|PF13041.2|8.4,PPR_2|PF13041.2|0.0031,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|6.8e-06,PPR_2|PF13041.2|0.042,PPR_2|PF13041.2|8.2e-05,PPR_2|PF13041.2|2.8e-08,PPR_2|PF13041.2|6.8,PPR_2|PF13041.2|1.2e-12,PPR_2|PF13041.2|0.019,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|0.026,PPR|PF01535.16|4.3e-05,PPR|PF01535.16|4.1e-06,PPR|PF01535.16|0.0023,PPR|PF01535.16|7.3e-07,PPR|PF01535.16|4.1e-06,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|13,PPR|PF01535.16|8.8e-06,PPR|PF01535.16|0.0026,PPR|PF01535.16|18,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|6.5e+02,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|6.1,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.0041,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.9,PPR_3|PF13812.2|19,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|3.6e+03,PPR_3|PF13812.2|0.075,PPR_3|PF13812.2|0.0065,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|5.7e+02,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.0074,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|81,PPR_3|PF13812.2|2e+02 R_Transcript_99846:198-1940(+)
MRSFSLPNQALSHFQAKPRNPRKNPPCIVQRVVDLCYKGQLREAVDSLHILAQKGFRLDSQTVAFLLGQCAKTRSLKEGKWVHLHLKLTGMKHPNTFVSNHLMRMYFECGDHVHARKLFDKMSVRNLYSWNNALSGYAKLGMLGAARRLFDKMGERDVVSWNTMVIGYAQSGDYSEALKFYREFRTASVGYNAFSFAGVLTAASKLRDPILTRQVHCQVLIAGFLNNVVLSSSIVDAYAKCCEMDSARKLFEEMWVRDIPAWTALISGYAKWGDMKSAQELFDVMPEKNLVSWTAMVSGYARNNLGHFALEMFRKMMILGIRPSQFTFSSCLCACSSLASLKHGKQIHAYMLRTGFRPNTMVMSSLIDMYSKCGSLKLSQLVFHLLGNKHDVMMWNPMITALAQHGYGEEAIRVFNDMILFGLKPNRVTFVILLSACSHSGLVDQGLSFFKSMSEDHGIPPDEEHYACLVDLLGRAGCIDELMKQLEMMPCKNDDRIWNALVGVCQIHENAKLGKQAAERLLELEPQSSAPYLLLSSIYAASGSWENVERMRHIMDQKSVRKSQASSWVETNHKAHALSA*

Click here to download the sequence:
Link to NCBI Protein BLAST