Transcript Information: R_Transcript_99884.p1


Annotated TAIR IDAT1G64310.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23866053-23867711 | Forward length=552
E-Value8.6E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6213829027213
Replicate 23.1190156415515
Replicate 34.6477438600889
Condition 2: 8 Hour
Replicate 13.1938084713798
Replicate 24.658517050247
Replicate 34.5379026550967
Condition 3: 24 Hour
Replicate 14.4917448923769
Replicate 23.8756523775109
Replicate 35.0357581435434


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_99884.p1 GENE.R_Transcript_99884~~R_Transcript_99884.p1 ORF type:complete len:552 (+),score=92.80,PPR_2|PF13041.2|1.9e+02,PPR_2|PF13041.2|3.3e-09,PPR_2|PF13041.2|19,PPR_2|PF13041.2|3.7e-08,PPR_2|PF13041.2|3.3e+03,PPR_2|PF13041.2|0.0024,PPR_2|PF13041.2|14,PPR_2|PF13041.2|1.7e-13,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|34,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|0.0011,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|1.1,PPR|PF01535.16|7.1e-05,PPR|PF01535.16|5.3,PPR|PF01535.16|0.00093,PPR|PF01535.16|0.059,PPR|PF01535.16|9.2e-06,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|0.86,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|7.5,PPR_1|PF12854.3|4.1e+02,PPR_1|PF12854.3|0.57,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|8.2e+03,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|2.7e-08,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|2.2e+02,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|2.8e+02 R_Transcript_99884:282-1937(+)
ATGTGGGTTCCATTTCGTACAATTTTATCCAACCTTTCTAAAACCCATCAAACCCTTTTAAAGACAAAGCAGTTACATGCGATAATCACCAAAACCCATCTCTCTTTTGACCCATTTTACGCCACTAGAATCATCAGGTACTATGCCTTCAATGGTGATCTTCCTTCTGCACACCGGCTGTTCGTCGAAAGTCCCAACAGAAGTATCTACCTTTGGAACTCTATTATAAGAGCTTATGCCCAAGACTATGAATTTAGGACTGCATTTGATCTGTTCAATGAGCTACTAAGATCAGAATTAAGGCCTGATAACTTCACTTTTGCATGTATTTTACGCGCTTGCTCTGAGAATTGTGATTTCAAAGGAGTGAGACTTGTTCATTGTAGGTTGCTGGTTTCTGGTTTTGAAATGGACCCAATATGCTGTTGTGCGCTTGTGAGTGCTTACTCAAAGGTTGGTCTCATTGATGATGCAAGTAAAGCGTTTCGTGGGATCACCGATCCAGATTTGGCAACATGGAATTCAATGATATATGCTTATAGGTATAATGGAGTTTGGGACGAAGGGCTGATGCTATTCAATGCAATGAGGAATAAAGATGTTGCACCAGATGGGTATACTGTGGTTGCTCTGCTCTCTGCATTAATGGAGCCGGGGTTATTAGAACTTGGACAGGAAATTCATGGGTTTTGCATGAAGACTGGTTTCCACTTGAATGAACATGTTGGAAGTTCATTAGTCAGCATGTATTCAAGATGCTCTTGCTTGGAGTCAGCATATGGAGTCTTTCGCAGCTTACCAAAACCCGACTTGATCACTTGGTCTGCACTGATTACAGGATTTGCACATTCAGGGGATGTTATAAGAGCACTTACACTCTTTAGAGAAAGGAATATGGAACACATGGAGGCTGATCCTGTTTTACTTGCTAGTATATTGGTGGCTGCCACTCATTTGACCAATGTAGGGCCTGGTTCTGAGATACACTGTTACATTCTTCGACATGGGTTAGAGATGGACGCTATGGTCTCCTCGGCTCTTATAGATATGTATGCAAAGTGTGGGTTTATGGACCTGGCCATGCGAGTTTTGAACTTTCTTCCAAGAGGAAACATTGTTTCGTATAATTCAGCTATTTCAGGTCTTGGTTCACATGGGAATGCAATTCAGGCATTTAGTTTGTTCGATGAGGTGTTGGAAAAAGGATTTAAGCCTGATGAATCCACATTCTCTGCTCTACTTCATGCTTGCTGCCAAGCTGGTCTTGTCAAAGAGGGGAAGGAAATCTTCAACAAAATGAAAGATGAATTTGCAATTGAACCTAGAAATGAACATTGTGTTCACTTGGTTAAGATCCTAGGTATGGCTGGAAAGCTGGACGAGGCATACAACTTTGTCCTGTCTTTGTCGGAACCAGTTGATGCTGGTATTTGGGGAGCACTACTAGCATGCTGTGAAATGCATGGAAATTCAGTGCTTGCAGAAACTATTTTGCAGCAGATACTACTGCATCAAAAATCTTATTCAATACAGCTCTCTAACATTTATGCTCAGCACGGAAGGTGGGATGATGTGGAGAAAATGCGGGATGATATGTCAGACGGTGGAGAAAGGAAGGTACCAGGGCTTAGCTGGGTAGGACGGAAGAGCTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_99884.p1 GENE.R_Transcript_99884~~R_Transcript_99884.p1 ORF type:complete len:552 (+),score=92.80,PPR_2|PF13041.2|1.9e+02,PPR_2|PF13041.2|3.3e-09,PPR_2|PF13041.2|19,PPR_2|PF13041.2|3.7e-08,PPR_2|PF13041.2|3.3e+03,PPR_2|PF13041.2|0.0024,PPR_2|PF13041.2|14,PPR_2|PF13041.2|1.7e-13,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|34,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|0.0011,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|1.1,PPR|PF01535.16|7.1e-05,PPR|PF01535.16|5.3,PPR|PF01535.16|0.00093,PPR|PF01535.16|0.059,PPR|PF01535.16|9.2e-06,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|0.86,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|7.5,PPR_1|PF12854.3|4.1e+02,PPR_1|PF12854.3|0.57,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|8.2e+03,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|2.7e-08,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|2.2e+02,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|2.8e+02 R_Transcript_99884:282-1937(+)
MWVPFRTILSNLSKTHQTLLKTKQLHAIITKTHLSFDPFYATRIIRYYAFNGDLPSAHRLFVESPNRSIYLWNSIIRAYAQDYEFRTAFDLFNELLRSELRPDNFTFACILRACSENCDFKGVRLVHCRLLVSGFEMDPICCCALVSAYSKVGLIDDASKAFRGITDPDLATWNSMIYAYRYNGVWDEGLMLFNAMRNKDVAPDGYTVVALLSALMEPGLLELGQEIHGFCMKTGFHLNEHVGSSLVSMYSRCSCLESAYGVFRSLPKPDLITWSALITGFAHSGDVIRALTLFRERNMEHMEADPVLLASILVAATHLTNVGPGSEIHCYILRHGLEMDAMVSSALIDMYAKCGFMDLAMRVLNFLPRGNIVSYNSAISGLGSHGNAIQAFSLFDEVLEKGFKPDESTFSALLHACCQAGLVKEGKEIFNKMKDEFAIEPRNEHCVHLVKILGMAGKLDEAYNFVLSLSEPVDAGIWGALLACCEMHGNSVLAETILQQILLHQKSYSIQLSNIYAQHGRWDDVEKMRDDMSDGGERKVPGLSWVGRKSC*

Click here to download the sequence:
Link to NCBI Protein BLAST