Transcript Information: S_Transcript_100055.p2


Annotated TAIR IDAT3G27750.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:10284820-10285488 | Forward length=222
E-Value4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30945350273466
Replicate 20.25654406462226
Replicate 30
Condition 2: 8 Hour
Replicate 10.24796965485038
Replicate 20.26013777488054
Replicate 30.74357607924353
Condition 3: 24 Hour
Replicate 10
Replicate 20.79059807824468
Replicate 30.293279586106


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100055.p2 GENE.S_Transcript_100055~~S_Transcript_100055.p2 ORF type:complete len:86 (+),score=18.77 S_Transcript_100055:577-834(+)
ATGGTGAGGTTGTTTGGGCCGTTGGATTTGTGGGACCGCTTTAGGGCTTGGACGGCTTGGATTGCTTCCGTGCTTAGGATACGGCCCTTTACTAGTGGGCTACGGTTGTCTCTTGGCCCACACCGGATTGTGACGTGGGATGTGGTGGTGGCTGAAGGGAGTTTTTGGGTTGGGGTCGGGGAGGAGAGAGAGAGGGGTGGGGCTGTGAAGGCTGAGCTCAGCTGTGAGGCCATTGATGGAGAGGGTCTGAGACTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100055.p2 GENE.S_Transcript_100055~~S_Transcript_100055.p2 ORF type:complete len:86 (+),score=18.77 S_Transcript_100055:577-834(+)
MVRLFGPLDLWDRFRAWTAWIASVLRIRPFTSGLRLSLGPHRIVTWDVVVAEGSFWVGVGEERERGGAVKAELSCEAIDGEGLRL*

Click here to download the sequence:
Link to NCBI Protein BLAST