Transcript Information: S_Transcript_100084.p1


Annotated TAIR IDAT5G59900.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24123983-24126706 | Reverse length=907
E-Value4.9E-304
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7126986237577
Replicate 23.2194628538863
Replicate 33.0078282024756
Condition 2: 8 Hour
Replicate 14.5076200563039
Replicate 24.8008258883533
Replicate 34.3226343319115
Condition 3: 24 Hour
Replicate 13.4454912801688
Replicate 22.9180873274267
Replicate 33.4639717637928


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100084.p1 GENE.S_Transcript_100084~~S_Transcript_100084.p1 ORF type:complete len:932 (+),score=148.56,PPR_2|PF13041.2|0.0091,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|2.8e-12,PPR_2|PF13041.2|5e-05,PPR_2|PF13041.2|0.043,PPR_2|PF13041.2|2.5e-18,PPR_2|PF13041.2|1.3e-10,PPR_2|PF13041.2|3e-14,PPR_2|PF13041.2|5.9e-19,PPR_2|PF13041.2|2e-14,PPR_2|PF13041.2|1.6e-15,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|7.8e-11,PPR_2|PF13041.2|8.9e-09,PPR_2|PF13041.2|8.2e-18,PPR_2|PF13041.2|3.8e-13,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|3.7e-16,PPR_2|PF13041.2|5.1e-13,PPR_2|PF13041.2|1.2e-06,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|6.3e-06,PPR_1|PF12854.3|0.00095,PPR_1|PF12854.3|46,PPR_1|PF12854.3|2.6e-10,PPR_1|PF12854.3|6.1e-09,PPR_1|PF12854.3|2.9e-07,PPR_1|PF12854.3|9.3e-12,PPR_1|PF12854.3|1.8e-12,PPR_1|PF12854.3|1.5e-09,PPR_1|PF12854.3|1.5e-08,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|16,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|5.2e-11,PPR_1|PF12854.3|73,PPR_1|PF12854.3|3.2e-11,PPR_1|PF12854.3|2.7e-08,PPR_1|PF12854.3|2.9e-05,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|9.1,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|3.1,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.74,PPR|PF01535.16|4.6,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|9.2e-06,PPR|PF01535.16|4.7e-06,PPR|PF01535.16|5.8e-09,PPR|PF01535.16|6.3e-07,PPR|PF01535.16|3.8e-07,PPR|PF01535.16|0.0088,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|8.5,PPR|PF01535.16|8.7e-08,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|8.5,PPR|PF01535.16|6.6e-09,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|0.00021,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|8.5e-05,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|5.2,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|9.2e-05,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|5.5e-06,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|1.4,MRP-S27|PF10037.5|17,MRP-S27|PF10037.5|0.044,MRP-S27|PF10037.5|0.69,MRP-S27|PF10037.5|3.6e+02,MRP-S27|PF10037.5|2.5e+02,MRP-S27|PF10037.5|0.0022,MRP-S27|PF10037.5|53,ATP13|PF12921.3|60,ATP13|PF12921.3|3.3e+03,ATP13|PF12921.3|8.5,ATP13|PF12921.3|82,ATP13|PF12921.3|1.1e+02,ATP13|PF12921.3|1.2e+03,ATP13|PF12921.3|3.4e+02,ATP13|PF12921.3|47,ATP13|PF12921.3|4.8e+02 S_Transcript_100084:580-3375(+)
ATGATGAGATTTAGAATGGTGGCTGGACGTGTACTTGTGCCTCTACCGTTACCTCTGTGGCCCCTCTCAAAAGTGAAATGCTGTTGGAAACTTTTAAGTACACCTTCAGCTTGCCATAACGGGGAGGAGCAAGAAGAAGAGAGAGTGGTGAGAGAGGTAAGTTCTATCCTCCGTGACCAGCCCCAGAGCTGCTGGAGAGATGCCTTTTCCTTTTCCCTTTCTCCCTCGGGTCCGAATTACCTTCAGCCCCGCCTTGTGGAGAAGGTGCTCCTCCAGACCCTTGATACTGATGATCCCAAGTTAGCTCTCCGCTTCTTCAACTTCTTAGGCCTCCACTACAACTTCCCCCACTCCACAACATCATTTTGCATCCTTGTCTATGCCCTCCTTCATTCTCGTCTCTTCTGGCCTGCCACTTCCCTCTTTCAAACCCTTCTTCTCCGCAACTGCCCTGCTTCCCTCCTTTTCCATGAGCTAATAGCTACCTATAAGTTGCTTCACCAGCATAATTACCGCTTGTTCTCTTCACCCTCCCCCTCCCCTCTGGCATTTGAGTTTCTAATCCAGAGTTATGTGCATAGTAGGAGGCCTCTCGATGCCGTTATCATCCTTAACCTCATGTTGTCTAATTCCCTCGTCCCTGAGGTTAGGACTCTCAATGCTTTGTTCCATGCATTGATTTCTATTCGACGTTTTCGTTTAGTTCTTGAGTTGTTTGACCCTCTTGTCCATTTTCATGGCATTAAACCTGATGTTTACATGTATACTGCTGTTGTTCGCTGCCTCTGTGAGCTCAGAGATTTAGACAGGGCCCGCCAGGTTGTCCACTGGATGGAGTCCTCTGCTGTTGCGTCTGACTCTGTCTTGAAATTGAATGTCATCCCCTATAATGTTCTGATTCGTGGCTTGTGTAAGAATCAAAGGGTTTTGGAGGCTCTGGAGCTTAAAAACTCCCTGCCTTTAAAGGGGTTGAGGCCGGATGCTATTACTTACTGCACCCTGCTTCTGGGGCTATGCCAAGCTCGAGACTACCCTCTAGCTTTGGCTATCACTACAGAGATGACTAACATTGGGTTGATCCCTAGCCAGGCTGCTGTATCTGCTCTTGTTGATGGCCTTAGAAGAATGGGAAACATCGAGCATGCTTTCCATGTGGTGAATGACTTGGCCAAGTACGGAGTGGTCCCTAATGTGGTCATTTATACTGCCTTAATCAACTCTCTTTGCAAAGATGGAAAACTGGAACAAGCTCAGTCACTCTTTATGGCTATGGAACAACGAGGACTCTTCCCTAACGAAGTGACGTTTCTGGTCATGATTGACTCCTATTGCAAGCATGGGAGGTTGGATAATGCAATTCACACCCTTGCTAAAATGGTGGACTCCGGTGTCAAGATGACAGACTATCCCTATAATTCTTTGATATATGGCCATTGCAAGTCTGGAAAGTTGAATACCGCCGAGTGCCTTTTCAGAGAAATGGCCAGCAAGGATCTGACACCCACTGTGGTCACTTATACTTCGTTGATTAGTGGATACTGCAGGGGAGGAGATCTCAACAATGCATTTAATCTCTATCATGAGATGACTGGAAAAGGCATAATGCCTAACACTTACACTTATTCTGCACTTATCTTTGGTCTTTGTCGTGCAAATAGGATGGATGCTGCACACAACTTATTCCGTGAAATGATTAGCAGAAATGTCAACCCAAATGAGGTGACCTACAATGTTTTGATTGATGGCTATGGCAGGAAAGGTAATATTTTGAGGGCTTCCCATTTGCTGCATGAAATGTTGGGCAAGGGTCTTGTTCCAGACACATACACGTACAGGTTCTTGATATCTGGACTCTGTTCTGCTGGGAGGGTGTGTGAAGCCAAAGATCTGGTGGATAATCTTCACAAAGAGAAACCCAAGTTGAATGAGACATGTTACAGTGCTCTTTTAAGCGGTTATTGCAAGGAGGGGAAATTAGAGGATGCCTTCCGTGTTTGTGGCGAAATGATGGGGAGACAAATCAAGATGGATACTGTCTGTTATGCTATACTTATTGATGCTTCACTGAAGCATAAAGATAAGGAAAGGCTATTGCAGATCTTACAAGAGATGAATCATAAAGGTTTGAAGCCTGACAATGTGATGTATACAAGTATGATTGATGCTTACACTAAGGCAGGTAATCTTAATAGGGCATTTGAACTTTGGAATTTGATGAACAGTGAAGGATGTGAGCCTAATGTTGTTACTTACACTACCCTCATCAGCGGCTTATGTAAACTGGGATATGCAAGCAAAGCACATCTTTTGTATAAGGAAATGCTGGAAAGTGATGCACATCCAAACCAAGTTACATATGGGTGCTTCCTTGGCTACTTTACTAGTGTAGGAAATATGGAGATTGCCATACAACTTCACAAGTTGATGCTTAAGGGGTCTCTGGCCAACACTGTCACATTTAATATTCTGATACATGGTTTCTGCAATCTTGGTAGGGTTGAAGAGGCCTCTGAGCTTATTGGAGAAATGATGGAAAACGGTATAAAACCTGATTGCATAAGCTATTCTACTATAATGAATGAGTATTGTAGAGGGGGTAAAATGCAGGAAGCTTTTAAGACATGGGACTCTATGTTGAGTAAGGGCATATGTCCTGATGCAGTGGCCTACAACATGCTGATCTCTGGTTGTACATTGTCTGGAGACCTCACGAAGGCTTCTATGTTGAGGGATGACATGACAAGAAGGGGTGTGAAAACAGATACGAAGTTTTACTATCCTTTCTTTAATACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100084.p1 GENE.S_Transcript_100084~~S_Transcript_100084.p1 ORF type:complete len:932 (+),score=148.56,PPR_2|PF13041.2|0.0091,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|2.8e-12,PPR_2|PF13041.2|5e-05,PPR_2|PF13041.2|0.043,PPR_2|PF13041.2|2.5e-18,PPR_2|PF13041.2|1.3e-10,PPR_2|PF13041.2|3e-14,PPR_2|PF13041.2|5.9e-19,PPR_2|PF13041.2|2e-14,PPR_2|PF13041.2|1.6e-15,PPR_2|PF13041.2|1.5e-05,PPR_2|PF13041.2|7.8e-11,PPR_2|PF13041.2|8.9e-09,PPR_2|PF13041.2|8.2e-18,PPR_2|PF13041.2|3.8e-13,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|3.7e-16,PPR_2|PF13041.2|5.1e-13,PPR_2|PF13041.2|1.2e-06,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|6.3e-06,PPR_1|PF12854.3|0.00095,PPR_1|PF12854.3|46,PPR_1|PF12854.3|2.6e-10,PPR_1|PF12854.3|6.1e-09,PPR_1|PF12854.3|2.9e-07,PPR_1|PF12854.3|9.3e-12,PPR_1|PF12854.3|1.8e-12,PPR_1|PF12854.3|1.5e-09,PPR_1|PF12854.3|1.5e-08,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|16,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|5.2e-11,PPR_1|PF12854.3|73,PPR_1|PF12854.3|3.2e-11,PPR_1|PF12854.3|2.7e-08,PPR_1|PF12854.3|2.9e-05,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|9.1,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|3.1,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.74,PPR|PF01535.16|4.6,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|9.2e-06,PPR|PF01535.16|4.7e-06,PPR|PF01535.16|5.8e-09,PPR|PF01535.16|6.3e-07,PPR|PF01535.16|3.8e-07,PPR|PF01535.16|0.0088,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|8.5,PPR|PF01535.16|8.7e-08,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|8.5,PPR|PF01535.16|6.6e-09,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|0.00021,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|8.5e-05,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|5.2,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|9.2e-05,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|5.5e-06,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|1.4,MRP-S27|PF10037.5|17,MRP-S27|PF10037.5|0.044,MRP-S27|PF10037.5|0.69,MRP-S27|PF10037.5|3.6e+02,MRP-S27|PF10037.5|2.5e+02,MRP-S27|PF10037.5|0.0022,MRP-S27|PF10037.5|53,ATP13|PF12921.3|60,ATP13|PF12921.3|3.3e+03,ATP13|PF12921.3|8.5,ATP13|PF12921.3|82,ATP13|PF12921.3|1.1e+02,ATP13|PF12921.3|1.2e+03,ATP13|PF12921.3|3.4e+02,ATP13|PF12921.3|47,ATP13|PF12921.3|4.8e+02 S_Transcript_100084:580-3375(+)
MMRFRMVAGRVLVPLPLPLWPLSKVKCCWKLLSTPSACHNGEEQEEERVVREVSSILRDQPQSCWRDAFSFSLSPSGPNYLQPRLVEKVLLQTLDTDDPKLALRFFNFLGLHYNFPHSTTSFCILVYALLHSRLFWPATSLFQTLLLRNCPASLLFHELIATYKLLHQHNYRLFSSPSPSPLAFEFLIQSYVHSRRPLDAVIILNLMLSNSLVPEVRTLNALFHALISIRRFRLVLELFDPLVHFHGIKPDVYMYTAVVRCLCELRDLDRARQVVHWMESSAVASDSVLKLNVIPYNVLIRGLCKNQRVLEALELKNSLPLKGLRPDAITYCTLLLGLCQARDYPLALAITTEMTNIGLIPSQAAVSALVDGLRRMGNIEHAFHVVNDLAKYGVVPNVVIYTALINSLCKDGKLEQAQSLFMAMEQRGLFPNEVTFLVMIDSYCKHGRLDNAIHTLAKMVDSGVKMTDYPYNSLIYGHCKSGKLNTAECLFREMASKDLTPTVVTYTSLISGYCRGGDLNNAFNLYHEMTGKGIMPNTYTYSALIFGLCRANRMDAAHNLFREMISRNVNPNEVTYNVLIDGYGRKGNILRASHLLHEMLGKGLVPDTYTYRFLISGLCSAGRVCEAKDLVDNLHKEKPKLNETCYSALLSGYCKEGKLEDAFRVCGEMMGRQIKMDTVCYAILIDASLKHKDKERLLQILQEMNHKGLKPDNVMYTSMIDAYTKAGNLNRAFELWNLMNSEGCEPNVVTYTTLISGLCKLGYASKAHLLYKEMLESDAHPNQVTYGCFLGYFTSVGNMEIAIQLHKLMLKGSLANTVTFNILIHGFCNLGRVEEASELIGEMMENGIKPDCISYSTIMNEYCRGGKMQEAFKTWDSMLSKGICPDAVAYNMLISGCTLSGDLTKASMLRDDMTRRGVKTDTKFYYPFFNT*

Click here to download the sequence:
Link to NCBI Protein BLAST