Transcript Information: S_Transcript_100150.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value2E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2544593811343
Replicate 23.8272185967118
Replicate 33.3874413214777
Condition 2: 8 Hour
Replicate 12.5387369425158
Replicate 21.2936102954944
Replicate 31.6675663092332
Condition 3: 24 Hour
Replicate 14.4581394878764
Replicate 25.0877944355065
Replicate 34.5468311342556


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100150.p1 GENE.S_Transcript_100150~~S_Transcript_100150.p1 ORF type:5prime_partial len:294 (+),score=30.97,PIF1|PF05970.10|7.7e-35 S_Transcript_100150:2-883(+)
TTCAGGCGGTTTACACTTGTTGAGAACATGCGTGCCAAAGAAGACCCAGAGTTCACTGCTTTCCTTCTTAAGCTTGGCAATGGTGAGTTCCAAAGTACTGAGCAAGCAGTTGTTCCGCTGCCTTCCTCAGTTCTGTGTAAGCTCCCCCACACTGCAAACTGCTTAGAGTATCTTGTTGCTTCAGTGTACCCAGACATTGATGAACTTGCAGCTAATCCTCATGCATTTACCGCAAGGGCAACATTGACTCCTACGAACGATGAAGTTGATTGCATCAACAAAATTGTCATAGAAAAGTTTCCTGGCCAAGATTATGTTTACAAGAGCTACGACACAATGATAGATGATGACTGCAATGCTCACCCGGTTGAGTTTCTCAACACACTGTGTCCAGGAGGAATGAGTCCACACAATCTAATACTGAAGCTTAATTGTCCGGTCATATTGCTCAGAAATTTGAACCCATCTATTGGGCTGTGTAATGGCACAAGACTGATTTGTAGAGGATTCAAATGCAATGTTGTCGTTTGCGAGATAGCAACGGGATATCGAGCAGGTGAATATGTCTTCATCCCACGCATAAGTTTGAGACCTTCAGCCTCTATTACATATCCATACAAGTTTGAAAGGCGACAATTCCCAATCAAATTGTGTTTCGCGATGACAATTAACAAATCCCAAGGCCAAACACTCACAGATGTAGCAATCTACCTACGGAGGCCATGTTTTTCACACGGGCAGCTCTATGTTGCTCTATCTAGAGCTAAGAAGGCCACCAGTGTGAAGGTCTTCGTTGATGACAAACAGGAGGATAATTCAGCTCCACCCCTTGTCTGTAATGTTGTATCGTTTGACCTACTGAGGAAGGCAGGGATACTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100150.p1 GENE.S_Transcript_100150~~S_Transcript_100150.p1 ORF type:5prime_partial len:294 (+),score=30.97,PIF1|PF05970.10|7.7e-35 S_Transcript_100150:2-883(+)
FRRFTLVENMRAKEDPEFTAFLLKLGNGEFQSTEQAVVPLPSSVLCKLPHTANCLEYLVASVYPDIDELAANPHAFTARATLTPTNDEVDCINKIVIEKFPGQDYVYKSYDTMIDDDCNAHPVEFLNTLCPGGMSPHNLILKLNCPVILLRNLNPSIGLCNGTRLICRGFKCNVVVCEIATGYRAGEYVFIPRISLRPSASITYPYKFERRQFPIKLCFAMTINKSQGQTLTDVAIYLRRPCFSHGQLYVALSRAKKATSVKVFVDDKQEDNSAPPLVCNVVSFDLLRKAGIL*

Click here to download the sequence:
Link to NCBI Protein BLAST