Transcript Information: S_Transcript_100295.p1


Annotated TAIR IDAT3G08620.1
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2617925-2620314 | Forward length=283
E-Value6.7E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3050443174557
Replicate 22.5956223008841
Replicate 33.6614255460089
Condition 2: 8 Hour
Replicate 16.5857823038205
Replicate 24.9349666117044
Replicate 33.6048859920189
Condition 3: 24 Hour
Replicate 14.176227726143
Replicate 24.1661418338874
Replicate 35.7491424746956


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100295.p1 GENE.S_Transcript_100295~~S_Transcript_100295.p1 ORF type:5prime_partial len:136 (-),score=26.20,STAR_dimer|PF16544.1|2.1e-14 S_Transcript_100295:158-565(-)
GGGCTATACAACCCAAACTTCTCACCAGCAAGGGCTGTTTCTCCTCAGATTAGAACTGCCTCTTCTGATGATAGTCAGTACTTGACGGAGTTGTTAGCAGAGCATCAGAAACTGGGTCCATTCATGCAAGTTCTTCCCATATGCAGTCGTCTCTTGAATCAAGAGATATTGAGGGTTTCTGGCATGTTGCCTAGCCAAGGGTTTGGAGACTTTGATAGACGTCAACACAGAAGCCCTAGTCCAATGGCATCTACAAATATAATGTCAAATATGCATAGTGGTGGATTTGGTGGATGGAATGGTCTGCATCAGGAGGTACTTTGTTTTCCCTTTAAGACTTGTATTACAACATGCAGATGCCAGGGACCAAATGTATGGATCATTTCTGATAGCTCAGTGTGTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100295.p1 GENE.S_Transcript_100295~~S_Transcript_100295.p1 ORF type:5prime_partial len:136 (-),score=26.20,STAR_dimer|PF16544.1|2.1e-14 S_Transcript_100295:158-565(-)
GLYNPNFSPARAVSPQIRTASSDDSQYLTELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLPSQGFGDFDRRQHRSPSPMASTNIMSNMHSGGFGGWNGLHQEVLCFPFKTCITTCRCQGPNVWIISDSSVCV*

Click here to download the sequence:
Link to NCBI Protein BLAST