Transcript Information: S_Transcript_10040.p1


Annotated TAIR IDAT2G28520.1
Annotated Gene Namevacuolar proton ATPase A1
Annotated Gene Symbol(s)VHA-A1
Annotation TypeOrtholog
Chromosome Positionchr2:12210026-12215532 | Forward length=817
E-Value6.2e-314
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.56742748388
Replicate 235.18243190756
Replicate 330.965581572465
Condition 2: 8 Hour
Replicate 132.075844283589
Replicate 231.440272882579
Replicate 332.894826550897
Condition 3: 24 Hour
Replicate 132.182997076678
Replicate 231.057815863884
Replicate 328.802951944114


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10040.p1 GENE.S_Transcript_10040~~S_Transcript_10040.p1 ORF type:complete len:486 (+),score=53.53,V_ATPase_I|PF01496.15|5.2e-200 S_Transcript_10040:1357-2814(+)
ATGTCACAAAAAAAATGCCTTGTTGGGGAAGGCTGGTGTCCATTATCTGCAAAAACTCAGATTCAGGAGGCTCTGCAGTGTGCAACTTCTCACAGTAGTTCACAAGTAGGTATAATATTTCATGTGATGGATGCTATCGAGTCACCTCCAACTTACTTCAGAACCAATCGTTTCACAAATGCTTTCCAAGAAATAGTTGATGCATACGGTGTTGCTAGATATCAAGAAGCTAATCCTGCAGTCTATTCCGTGGTTACTTTTCCATTTTTGTTCGCGGTTATGTTTGGGGATTGGGGTCATGGAATATGCCTTCTATTGTTAGCATTATTCCTCATAGCTCGAGAAAGCAAATATAGTTCACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGTTATGTGGTCCTTCTAATGTCAGTTTTTTCGATTTATTGCGGGCTTATCTACAATGAGTTCTTCTCTGTTCCATTCCATATCTTTGGCCAATCTGCATACAGATGTAGAGATGCAACTTGCAGTGATTCTCGTACAGCTGGTTTGGTGAAATTTCGGGATCCCTACCCGTTTGGTGTGGATCCCAGTTGGCGTGGAAGCCGTACAGAGCTACCATTCCTGAACTCACTGAAGATGAAGATGTCTATATTGCTCGGTTTGGCTCAAATGAACTTGGGCATCATTTTGAGTTACTTTAATGCTCGTTTCTTTGGAAACTCACTGGATGTTAGGTATCAGTTTGCACCACAGATGATATTTCTTAACAGCCTTTTTGGCTATCTATCAATCTTAATTATTGTCAAGTGGTGCACTGGTTCTCAAGCAGACCTTTACCATGTCATGATCTACATGTTTCTGAGTCCTTTCGAGGACCTTGGAGATAATCAGTTATTCTGGGGGCAAAGACCATTTCAGATTTTGCTTTTGATCCTAGCTATTGTTGCGGTTCCATGGATGCTCTTCCCGAAGCCATTTATTTTGAAAAGGCTTCACTCTGAGAGATTCCAAGGTCGTACATATGGAATGCTTCGCTCTTCTGAAGTAGATCTGGATGGGGAGCCTGACTCCGCACATGAACGCCATGAGGAGTTTAATTTTAGTGAGATCTTTGTGCATCAATTAATACACTCCATAGAGTTTGTCCTGGGAGCCGTTTCAAATACAGCCTCATATCTACGGCTTTGGGCTTTGAGCTTGGCTCACTCAGAACTGTCAACTGTATTCTATGAGAAGGTCTTGCTCCTGGCCTGGGGGTATGACAACCTTGTTATCCGGTTGGTGGGGCTAGCAGTTTTTGCCTTTGCTACTGCTTTCATACTACTTATGATGGAGACTCTTAGTGCCTTTCTGCATGCTTTGAGGCTCCACTGGGTCGAATTTCAAAACAAGTTCTATCATGGTGATGGCCACAAGTTTAGACCATTCTCCTTTGCCCTATTAACAGATGAGGATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10040.p1 GENE.S_Transcript_10040~~S_Transcript_10040.p1 ORF type:complete len:486 (+),score=53.53,V_ATPase_I|PF01496.15|5.2e-200 S_Transcript_10040:1357-2814(+)
MSQKKCLVGEGWCPLSAKTQIQEALQCATSHSSSQVGIIFHVMDAIESPPTYFRTNRFTNAFQEIVDAYGVARYQEANPAVYSVVTFPFLFAVMFGDWGHGICLLLLALFLIARESKYSSQKLGSFMEMLFGGRYVVLLMSVFSIYCGLIYNEFFSVPFHIFGQSAYRCRDATCSDSRTAGLVKFRDPYPFGVDPSWRGSRTELPFLNSLKMKMSILLGLAQMNLGIILSYFNARFFGNSLDVRYQFAPQMIFLNSLFGYLSILIIVKWCTGSQADLYHVMIYMFLSPFEDLGDNQLFWGQRPFQILLLILAIVAVPWMLFPKPFILKRLHSERFQGRTYGMLRSSEVDLDGEPDSAHERHEEFNFSEIFVHQLIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGHKFRPFSFALLTDEDD*

Click here to download the sequence:
Link to NCBI Protein BLAST