Transcript Information: S_Transcript_10050.p1


Annotated TAIR IDAT4G14220.1
Annotated Gene NameRING-H2 group F1A
Annotated Gene Symbol(s)RHF1A
Annotation TypeOrtholog
Chromosome Positionchr4:8196012-8198240 | Forward length=371
E-Value1.3E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3564393658222
Replicate 26.1435003442673
Replicate 35.9226672788799
Condition 2: 8 Hour
Replicate 19.7524650840547
Replicate 29.6399022593944
Replicate 311.394446992094
Condition 3: 24 Hour
Replicate 15.2392200241669
Replicate 27.2782159127294
Replicate 36.2542467833824


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10050.p1 GENE.S_Transcript_10050~~S_Transcript_10050.p1 ORF type:5prime_partial len:492 (+),score=88.09,zf-RING_2|PF13639.2|2.9e-10,zf-rbx1|PF12678.3|7.1e-08,zf-RING_11|PF17123.1|2e-06,zf-RING_11|PF17123.1|42,zf-C3HC4|PF00097.21|4e-06,zf-RING_5|PF14634.2|1.2e-05 S_Transcript_10050:1-1476(+)
CTAATGTACATCCAAGGAAAGGAGGGTACTGGATTCTTGAAACCGTCACGTCTGAATGGGATCAGATCTTTCCTCCTTCCGCGTCTTTTATCTCTTTCTCTCTCCTCTTTTTGGTTTATTCTTTCCTTTCTTTTGACCCCCTCTCTTCTTGACTCTTTCTCTTCCCGCTCTCTCTCTCCTCCCCCAAACCCAAACCCTCTCTACTCCCTTCTTTTACCTTCTACCTCACTTCTCACCTACACCTCTCTCTCAACAATGGCGGAATCCACTACTACATCAACAACAACCGCTGAAAAATCTCCGATGATGATGACGTCATCAATGCCGGCACCTTCAGCTGGATCATCCTCGTTTACAACTCCACCGCCACCAATTGACGACGATTTTGACGACGACGCTTGCAGCATTTGCCTTGAGCCTTTTTCTCTCTCTGATCCTTCCACTGTGACAGCTTGCAAGCATGAGTACCACCTTCATTGTATTCTTGAATGGTCGCAACGGAGTAAAGAATGCCCAATTTGTTGGCAGTCCCTCGCCTTGAAGGACCCTGCAAGCCAAGAGCTTTTAGCTGTGGTTGAGCTGGAAAGGAAGGCTAGGCGAAGGAACGTAACAACCAATGAATTCAGCAATGCTCGTCACTATGAGGGGTCTGATTCTGTAAACGGCTCTCAATGGACCAATGATTCTGATTTCAATGAGCGTATAATGCGGCATTTGGCTGCTATGATGAGCCGAGCTCGGCAAGCCCATAGAAACGAGCGGCACCGATCTTCTGAGCGGAGCCCTTCTCCGGTTCTTATGTTTCCATCACGTGCAAGCAACTCAACTGTGCATCCAAACACACCTGAAGAGTGGTGTTCTGCTTATGGCTCATCAGGAGGCAGCTCACCCACTTCTAGCATATCTTCTCTTGACGCCCAGCCTGCTCTATCCCCTAGTCCTTCTTTTGCCAATGTGTCTTCAGGCTCCGTGCCAAAGAGAGACATTCGTTACAATTCCGGATCCTTTCAAAGCCAGTTCCCTGATAATACTCAAAGACCAAGGTCATCAGAGCTGCTTGCCTTCTCAGAGACTGTTAAATCCAGATTAACTGCTGCTTCAGCCAGATACAAGGATTCAATTTCAAAGGGCACACAAGGTTTCAGAGAGAAATTTCTGGCACGTAATAATTCTGTCAAGGAACTGAGTAAAGGAGTTCAGCGTGAGATGAATGCCAGTATAGCTGGTGTTGCAAAGATGATTGAGCGATTGGATCTCAAATCCAAGCGACAGTCACATGTTGTTGAAGGTCAAAGTAATGCTGGGGAAAGCTCCAACTTCTTTACAAAGGGAAAAGGGGTGCTGGATAATATTATAGCTAACTCCCGTGAAAATCGTGTGGTGACTGACCAAGGTATTATTTCCCATGAACAATCTCAGGCCACCTGCTCCATCCCAAGCCATAAAGATACCTCCTATGCACAGAGAGGTAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10050.p1 GENE.S_Transcript_10050~~S_Transcript_10050.p1 ORF type:5prime_partial len:492 (+),score=88.09,zf-RING_2|PF13639.2|2.9e-10,zf-rbx1|PF12678.3|7.1e-08,zf-RING_11|PF17123.1|2e-06,zf-RING_11|PF17123.1|42,zf-C3HC4|PF00097.21|4e-06,zf-RING_5|PF14634.2|1.2e-05 S_Transcript_10050:1-1476(+)
LMYIQGKEGTGFLKPSRLNGIRSFLLPRLLSLSLSSFWFILSFLLTPSLLDSFSSRSLSPPPNPNPLYSLLLPSTSLLTYTSLSTMAESTTTSTTTAEKSPMMMTSSMPAPSAGSSSFTTPPPPIDDDFDDDACSICLEPFSLSDPSTVTACKHEYHLHCILEWSQRSKECPICWQSLALKDPASQELLAVVELERKARRRNVTTNEFSNARHYEGSDSVNGSQWTNDSDFNERIMRHLAAMMSRARQAHRNERHRSSERSPSPVLMFPSRASNSTVHPNTPEEWCSAYGSSGGSSPTSSISSLDAQPALSPSPSFANVSSGSVPKRDIRYNSGSFQSQFPDNTQRPRSSELLAFSETVKSRLTAASARYKDSISKGTQGFREKFLARNNSVKELSKGVQREMNASIAGVAKMIERLDLKSKRQSHVVEGQSNAGESSNFFTKGKGVLDNIIANSRENRVVTDQGIISHEQSQATCSIPSHKDTSYAQRGN*

Click here to download the sequence:
Link to NCBI Protein BLAST