Transcript Information: S_Transcript_100511.p1


Annotated TAIR IDAT5G56850.1
Annotated Gene Nameunknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22985432-22987977 | Reverse length=551
E-Value5E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6964119826789
Replicate 25.7902343635107
Replicate 35.6746880257232
Condition 2: 8 Hour
Replicate 17.5266083472234
Replicate 26.3774953135872
Replicate 35.6906561479362
Condition 3: 24 Hour
Replicate 14.1515163194794
Replicate 24.5122520785488
Replicate 36.0487255813174


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100511.p1 GENE.S_Transcript_100511~~S_Transcript_100511.p1 ORF type:5prime_partial len:221 (-),score=30.05 S_Transcript_100511:717-1379(-)
CTCTTGGATCTTCTCATCGTTTTTTTTTTTTTTATCTATAACTTTTCTTCTTCAATGCCGGGAACTATCCAGGTTTCGATATTAGAATTGGTGGGACTTCCATCCTTGGTAAAATCTTCATCAATGGGCATTAAGGTTTCTGTGGGAAAACAAGCACAGGAAACACAGGACACCGGAGACTTTTCTTTTCGATTAGCATCTCTACGCGACAATTTGAATGTGTCAATACATGATTCTGAAGGGAACGAAATAGCAAATACAGTTGTTGAGACGAGGTCAATCGTTGAAATGGGTACTTGGGATGATCTATTTGCTCTTAAAGGTGGCGGGCATGTTCATATGAAACTGCATTTCATCCTCACTGATCGTGAACAAAACCGGATTCGTAGCATGAGAGAATATGCAACCCAGAAAAAACAACATGATCTTCTTAAAAGGAGAAGTAGTAGCTCAGAGCTAGCCCTTGCTTCTGGTGGTAGCCATGCATCTTCTCAAGATTCACTGAAGACTGCCCGTAAAGCTGAGCAGCAGTATATGAATCCTGCAGATCACCATGTAAATACGAACTCTGCTGGATTTGATGCTAAAGTTTTGGGTAGAGCTCATCCCAGTCAGAAGATAGAAGTAATACCAGTTCACTTTTGTTTCTTATGTTCAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100511.p1 GENE.S_Transcript_100511~~S_Transcript_100511.p1 ORF type:5prime_partial len:221 (-),score=30.05 S_Transcript_100511:717-1379(-)
LLDLLIVFFFFIYNFSSSMPGTIQVSILELVGLPSLVKSSSMGIKVSVGKQAQETQDTGDFSFRLASLRDNLNVSIHDSEGNEIANTVVETRSIVEMGTWDDLFALKGGGHVHMKLHFILTDREQNRIRSMREYATQKKQHDLLKRRSSSSELALASGGSHASSQDSLKTARKAEQQYMNPADHHVNTNSAGFDAKVLGRAHPSQKIEVIPVHFCFLCST*

Click here to download the sequence:
Link to NCBI Protein BLAST