Transcript Information: S_Transcript_100592.p1


Annotated TAIR IDAT5G20200.1
Annotated Gene Namenucleoporin-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6816776-6821620 | Forward length=762
E-Value2E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2947332300359
Replicate 24.5338454980757
Replicate 35.7452502459384
Condition 2: 8 Hour
Replicate 15.8337782412052
Replicate 26.7056980870385
Replicate 34.6035534748978
Condition 3: 24 Hour
Replicate 16.2046331380353
Replicate 24.9243360231331
Replicate 35.2821035403384


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100592.p1 GENE.S_Transcript_100592~~S_Transcript_100592.p1 ORF type:complete len:764 (+),score=133.74 S_Transcript_100592:142-2433(+)
ATGCGAGAGGCCAATGAACAACCGTCATCGTCAGCGGGACTCTACGGCGTCGGAGAGTCCAGAGGCGCCGGAGGAAAATTACGGCGAGAGAGGAATAGACCTCCGTCAACACCTTACGACCGTCCACCACAACCTCAACCTCCTGCAAACAACCGCGGGTGGATTTCGAAAATCGTTACTCCCGCTAAACGCCTCATCTCCGGTAGCGCCACTCGTCTTCTCCCCTCTCTCTTCGCTCCTCCTCCTCTTCCCGAACCTCCCTCTCCCGCCGATGAAAGGCCAACAGAGGTAGAGCAAGAGACTCCAGATCACAATGCAAGTTGTTCTTTGGCTGTAAGGCTTCTTGTTGCTCCCAAATCGATCAGTGACTTAGGCCCGAGTGAAGCCGAAGGACAAGCAAAACTTCACAATTCTGATAAAGATAAACATGTGAATTTAAGAGACCCTTCTGATGATCAACTTCCTGACATTGAGCAGCTTATCAAAATGAAGACATTTTCTAGAGGAGAGATTGATCGTTTGATGGAGGTATTGCATTCAAGAGTTATTGATGAAGAGCAAGAAAGACAAATTTGTGCTGTGTCTGGACCGGGCAAAGCTGAAAAGCCAGAATCATCCCATGGAAAACAAAATACAGCAATAGATAAGGAACAACTAGACAAATTTGAATGGACTGCTACTCCTCCCCCGCGCTCAACTGTGCCTGGTGAAATTGGTGCTTCGCCAGTTGATATCGCTAGGGCATATATGGGTTCAAGAACATCAGAGGTGGGATTTACATCCATGAGTCTGACTTCAAGAAATGAGAAGTTTTCACTTCCTAGCAGTGAGCTTCCCTCAAAGACATTTATGCCATCACCTTTGCCAAAAGCTCCAGTATGCTGGCCTGGTGCCATCACACAGGATCAGCAGGGGTTTTCAACACCCCAAAGTCAAAAAGGCAGATATGGGTTTCAAAGTTTTCCTCGAACCCCTTATTCAAGGACACTGTATACAAAGTCCAAGTCCAAGGTAACTCCGCTTCGGGGTGACAGCTTTTTACCTTTCCAGCCAATGAGAACTCCTGTGTATGAAAAGTCAACATATAATGTAGCTGAAGGTAGGTATGCATCTGGAGGACCCATTCGTAGGATGCGAAATAAATATAGTTCAACTACACCAGCGAGGGACTCGACTCTTTTGCAGTCTGTACAGAGAAGTCCTTGGACAAAAGACTCCAATGCTGGCCCTATGGTTAAGAAAAATTTTGAGCCCGACATTTCTAGTACCCATATGGAACCAATACTAAGCAAGCAACAGAACTCTGAAGTAGGTGTTCCTAGTGCTCATCCGCACAGCAGTAAGCTTGCAAGGCAGATATTGGAGCAAATTGACAGACCAATAACTCTTAAAGAAAAATCAGAAGAGTTGATGCTAGTTGCTTCGTGGAAGAACTCATCCAAAGCTGCTTTGGCTGCACCCATCCAAAACAGCAGTTCTCCTTCTACTTCCGGAGCAGGTGCCAGCAAAGAAATGTTTGTTGATGCTGCAAAACTTGCTGGTCAAACTAATGGAGGGAACAATGCTCTTCCTCTAGATCAAAGTAATGTCATAAGTGGTTCTGGAAAAGGCGTGGCATCTGCTTTTCCGATATCCCTTGATAAAACAAGCAATATTTCTGGTATGAGTTTTGGGCCACAATCAAGTGTCCAAAAGTTCGATTCGCATATGAAGAGTACATATGAGGCAAACAATGACAATCTAACAAAGAAGAATGGTCAGTCCTGGCTCACTGGCGACCAAAGTAAAGCGGTACACATTACAAACAATTCATCTGGATCTGAGCCACAGAACGCTCAAAGAAGGCCGGTTTTGCCATCAATTTCAGTTGACAAGTCTGGTATAAGGAACGCATTTACTTCAGATACTAGTACTGGGTTCTCTTTCCCGGTTACGAGATCATCTAGCACATCAATGGAGCCACCTACACCATCTATCATGCCTTCTACCTCAATGATTCCTGCAGAACAACCAAAAGTTCCTGCCCAGTCCTCTACGTTTACCTTCGGCAGCAAGATAACCATTGCGCCACCTGTTGTTCCAATTCCTCCTCCAAGCACGGTCTCTACTCTGAACGGTGCTTCGGCTCCCAAGTTCAAATTTGGGTCTGGACAGACTAGGTTATCCTTTGCATTAGCTGGGAACGATGCTGCTTCTGCCCCTAACGATGCTGTGATGCCCAAATACAAGTTTGGGTCGGGGAAAAGTAGGTTGAACTTTGGATCAGTAGGGAGCGATGCTGTCCGCTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100592.p1 GENE.S_Transcript_100592~~S_Transcript_100592.p1 ORF type:complete len:764 (+),score=133.74 S_Transcript_100592:142-2433(+)
MREANEQPSSSAGLYGVGESRGAGGKLRRERNRPPSTPYDRPPQPQPPANNRGWISKIVTPAKRLISGSATRLLPSLFAPPPLPEPPSPADERPTEVEQETPDHNASCSLAVRLLVAPKSISDLGPSEAEGQAKLHNSDKDKHVNLRDPSDDQLPDIEQLIKMKTFSRGEIDRLMEVLHSRVIDEEQERQICAVSGPGKAEKPESSHGKQNTAIDKEQLDKFEWTATPPPRSTVPGEIGASPVDIARAYMGSRTSEVGFTSMSLTSRNEKFSLPSSELPSKTFMPSPLPKAPVCWPGAITQDQQGFSTPQSQKGRYGFQSFPRTPYSRTLYTKSKSKVTPLRGDSFLPFQPMRTPVYEKSTYNVAEGRYASGGPIRRMRNKYSSTTPARDSTLLQSVQRSPWTKDSNAGPMVKKNFEPDISSTHMEPILSKQQNSEVGVPSAHPHSSKLARQILEQIDRPITLKEKSEELMLVASWKNSSKAALAAPIQNSSSPSTSGAGASKEMFVDAAKLAGQTNGGNNALPLDQSNVISGSGKGVASAFPISLDKTSNISGMSFGPQSSVQKFDSHMKSTYEANNDNLTKKNGQSWLTGDQSKAVHITNNSSGSEPQNAQRRPVLPSISVDKSGIRNAFTSDTSTGFSFPVTRSSSTSMEPPTPSIMPSTSMIPAEQPKVPAQSSTFTFGSKITIAPPVVPIPPPSTVSTLNGASAPKFKFGSGQTRLSFALAGNDAASAPNDAVMPKYKFGSGKSRLNFGSVGSDAVRC*

Click here to download the sequence:
Link to NCBI Protein BLAST