Transcript Information: S_Transcript_100596.p1


Annotated TAIR IDAT5G20200.1
Annotated Gene Namenucleoporin-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6816776-6821620 | Forward length=762
E-Value5E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.391724925569
Replicate 25.7019417168123
Replicate 35.9879013258443
Condition 2: 8 Hour
Replicate 15.4282811716339
Replicate 24.7068045190074
Replicate 34.7337791434439
Condition 3: 24 Hour
Replicate 15.7023656904019
Replicate 24.4444617506863
Replicate 35.5357474083956


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100596.p1 GENE.S_Transcript_100596~~S_Transcript_100596.p1 ORF type:complete len:770 (+),score=138.87 S_Transcript_100596:142-2451(+)
ATGCGAGAGGCCAATGAACAACCGTCATCGTCAGCGGGACTCTACGGCGTCGGAGAGTCCAGAGGCGCCGGAGGAAAATTACGGCGAGAGAGGAATAGACCTCCGTCAACACCTTACGACCGTCCACCACAACCTCAACCTCCTGCAAACAACCGCGGGTGGATTTCGAAAATCGTTACTCCCGCTAAACGCCTCATCTCCGGTAGCGCCACTCGTCTTCTCCCCTCTCTCTTCGCTCCTCCTCCTCTTCCCGAACCTCCCTCTCCCGCCGATGAAAGGCCAACAGAGGTAGAGCAAGAGACTCCAGATTGCAACGCAAGTTGTTCTGTGGATGCAAGGCTTCTTGTTGCTCCCAAATCGATCAGTGACTTAGGCCCGAGTGAAGCCGAAGGACAAGCAAAACTTCACAATTCTGATAAAGATAAACATGTGAATTTAAGAGACCCTTCTGATGATCAACTTCCTGACATTGAGCAGCTTATCAAAATGAAGACATTTTCTAGAGGAGAGATTGATCGTTTGATGGAGGTATTGCATTCAAGATTTATTGATGAAGAGCTAGAAAGACAACATTGTGCTGTGTCTGGGCCGGGCAAAGCTGAAAAGCCGGAATCATCCCATGGAAAGCAAAATACAGCAATAGATAAGGAACAACTAGACAAATTTGAATGGACTGCTACTCCTCCCCCGCGCTCAACTGTGCCTGGTGAAATTGGTGCTTCGCCAGTTGATATCGCTAGGGCATATATGGGTTCAAGAACATCAGAGGTGGGATTTACATCCATGAGTCTGACTTCAAGAAATGAGAAGTTTTCACTTCCTAGCAGTGAGCTTCCCTCAAAGACATTTATGCCATCACCTTTGCCAAAAGCTCCAGTATGCTGGCCTGGTGCCATCACACAGGATCAGCAGGGGTTTTCAACACCCCAAAGTCAAAAAGGCAGATATGGGTTTCAAAGTTTTCCTCGAACCCCGTATTCAAGGACACTGTATGCAAAATCTAAGTCCAAGGTAACTCCACTTCAGGGTGACAGCGAGAAAATGCTGAACATTTCACCTGTCCAGGCAATGAGAACTCCTGTGTATGGAAAGTCAATGAATAATGTGGCTGAAGGTAGTCATGCATCTGGAGGACCCATTCGTAGGATGCGAAATAAATATAGTTCAACTACACCAGCGAGGGACTCGACTCTTTTGCAGTCTGTACAGAGAAGTCCTTGGACAAAAGACTCCAATGCTGGCCCTATGGTTAAGAAAAATTTTGAGCCCGACATTTCTAGTACCCATATGGAACCAATACTAAGCAAGCAACAGAACTCTGAAGTAGGTGTTCCTAGTGCTCATCCGCACAGCAGTAAGCTTGCAAGGCAGATATTGGAGCAAATTGACAGACCAATAACTCTTAAAGAAAAATCAGAAGAGTTGATGCTAGTTGCTTCGTGGAAGAACTCATCCAAAGCTGCTTTGGCTGCACCCATCCAAAACAGCAGTTCTCCTTCTACTTCCGGAGCAGGTGCCAGCAAAGAAATGTTTGTTGATGCTGCAAAACTTGTTGGTCAAACTAATAGAGAGAACAATGCTCTTTCTCTAGATAAAAGTAATGTCACAAGTGGTTCTGGAAAAGGTGTGGCATCTGCTTTTCCAATATCCCTTGATAAAGCTAGTAATATTTCTGGTATGAATTTCGGGCCACAATCATCAAGTGTCCAAAAGTTCGATTCGCATATGAAGAGTACTGATGAGGCAAACAATGACAATCTGACAAAGAAGAATGGTCAGTCTTGGCTCACTGGCGACCAAAGTAAAGGGTTACACATTACAAACAGTTCATCTGGATCTGAGCCACAGAACGCTCAAAGAAGGCCGGTTTTGCCATCAATTTCAGTTGACAAGTCTGGTATAAGGACCTCATTTGCTTCAGATACTAGTACTGGGTTCTCTTTCCCGGTTACGAGATCATCTAGCACATCAATGGAGCCACCTACACCATCTATCATGCCTTCTACCTCAATGATTCCTACACAACAACCAGAAGTTCCTGCCCAGTCCTCTACATTTACCTTCGGCAGCAAGATAACCATTGCGCCGCCTGTTGTTCCGATTTCTCCTCCAAGCACGGGCTCTACTCCAAACGATGCTTCGGCGCCCAAGTTCAAATTTGGTTCTGGACAGACCAGGTTATCTTTTGCATTAACTGGGAACGATGCTGCCTCTGCCCCTAACGATGCTGTGATCCCCAAATACAAGTTTGGGTCGGGGAAAAGTAGGTTGAACTTTGGATCAGTAGCGAGCGATGCTGTCCACTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100596.p1 GENE.S_Transcript_100596~~S_Transcript_100596.p1 ORF type:complete len:770 (+),score=138.87 S_Transcript_100596:142-2451(+)
MREANEQPSSSAGLYGVGESRGAGGKLRRERNRPPSTPYDRPPQPQPPANNRGWISKIVTPAKRLISGSATRLLPSLFAPPPLPEPPSPADERPTEVEQETPDCNASCSVDARLLVAPKSISDLGPSEAEGQAKLHNSDKDKHVNLRDPSDDQLPDIEQLIKMKTFSRGEIDRLMEVLHSRFIDEELERQHCAVSGPGKAEKPESSHGKQNTAIDKEQLDKFEWTATPPPRSTVPGEIGASPVDIARAYMGSRTSEVGFTSMSLTSRNEKFSLPSSELPSKTFMPSPLPKAPVCWPGAITQDQQGFSTPQSQKGRYGFQSFPRTPYSRTLYAKSKSKVTPLQGDSEKMLNISPVQAMRTPVYGKSMNNVAEGSHASGGPIRRMRNKYSSTTPARDSTLLQSVQRSPWTKDSNAGPMVKKNFEPDISSTHMEPILSKQQNSEVGVPSAHPHSSKLARQILEQIDRPITLKEKSEELMLVASWKNSSKAALAAPIQNSSSPSTSGAGASKEMFVDAAKLVGQTNRENNALSLDKSNVTSGSGKGVASAFPISLDKASNISGMNFGPQSSSVQKFDSHMKSTDEANNDNLTKKNGQSWLTGDQSKGLHITNSSSGSEPQNAQRRPVLPSISVDKSGIRTSFASDTSTGFSFPVTRSSSTSMEPPTPSIMPSTSMIPTQQPEVPAQSSTFTFGSKITIAPPVVPISPPSTGSTPNDASAPKFKFGSGQTRLSFALTGNDAASAPNDAVIPKYKFGSGKSRLNFGSVASDAVHC*

Click here to download the sequence:
Link to NCBI Protein BLAST