Transcript Information: S_Transcript_100620.p1


Annotated TAIR IDAT5G62310.1
Annotated Gene NameAGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Annotated Gene Symbol(s)IRE
Annotation TypeHomolog
Chromosome Positionchr5:25023405-25028414 | Forward length=1168
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3647692941118
Replicate 21.8857085091893
Replicate 31.7339324523043
Condition 2: 8 Hour
Replicate 12.9162926929413
Replicate 22.6769733415058
Replicate 31.8218673166651
Condition 3: 24 Hour
Replicate 11.8670840590251
Replicate 22.1307857037592
Replicate 31.940157261932


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100620.p1 GENE.S_Transcript_100620~~S_Transcript_100620.p1 ORF type:5prime_partial len:117 (+),score=20.01 S_Transcript_100620:2-352(+)
GGTCGCCGACGATTCTCTCTCCTCTCGTTCTCATTCTGTTTCTCTTATCGCAACTCATGGATTTTTCTTCTGGGTGTTAGACATTCAATTTCTGAGTTGACAGATTTTGGGCTCTCTAAAGTTGGCCTTATCAACAGTAGTGATGACTTATCTAGTCCATCAGTTAGCAGCTCTGCTTGTCTGGGTGACGAGAAACAACCATCAAGGAGAGAGCAGCGCCAGAAACACTCTATTGTGGGCACTCCTGATTATTTGGCTCCTGAGATACTTCTCGGCATGGGACATGGTCTGGACTTCTTTTTGCTTAATGTCAATGAAGCTGTTGTGATTTATTCCTTTTTGGATCCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100620.p1 GENE.S_Transcript_100620~~S_Transcript_100620.p1 ORF type:5prime_partial len:117 (+),score=20.01 S_Transcript_100620:2-352(+)
GRRRFSLLSFSFCFSYRNSWIFLLGVRHSISELTDFGLSKVGLINSSDDLSSPSVSSSACLGDEKQPSRREQRQKHSIVGTPDYLAPEILLGMGHGLDFFLLNVNEAVVIYSFLDP*

Click here to download the sequence:
Link to NCBI Protein BLAST