Transcript Information: S_Transcript_100642.p1


Annotated TAIR IDAT5G13980.1
Annotated Gene NameGlycosyl hydrolase family 38 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4508626-4514334 | Forward length=1024
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 158.424460437583
Replicate 265.159200646538
Replicate 360.651330327409
Condition 2: 8 Hour
Replicate 1162.58278623703
Replicate 2170.75655900526
Replicate 3162.94505078793
Condition 3: 24 Hour
Replicate 1112.32388585883
Replicate 291.470174418436
Replicate 3103.80501268772


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100642.p1 GENE.S_Transcript_100642~~S_Transcript_100642.p1 ORF type:complete len:1029 (+),score=171.92,Glyco_hydro_38C|PF07748.9|3.1e-99,Glyco_hydro_38|PF01074.18|2.1e-90,Alpha-mann_mid|PF09261.7|5.6e-20 S_Transcript_100642:243-3329(+)
ATGAAGAAATTCTCGAGCTCTTCTTCAATGGCGGCAGCTTCGATAATAGAGGTGATGTTAGTGGTGGTGAGTGTAGTTATAGGAGTGGTGGAATCGAAGTATATGGTGTACAATACATCAGCGAAGATAGTACCGGGAAAACTCAACGTTCATATGGTCCCTCACACCCACGATGATGCCGGTTGGTTGAAGACTGTCGATCAGTACTACGTCGGTTCTAACAACTCCATTCAGGTGGCGTGTGTACGGTACATTCTGGACTCGTTGATTCCGGCCTTGCAGGCTGATAAGAATCGCAAATTCGTTTACGTTGAGATGGCGTTTTTTATGCGGTGGTGGAGAGAACAAAGTGGGGATATGAAGAAAGTAGTCAAAGGCCTGGTCAACTCTGGTCAACTGGAAATCATAAACAGGGGTATAGTCATGCATGATGAGGCAGATCCACACTACATAGACATGATTGATCAGACAACGCTTGGTCATCGATTCCTTAGAAAGGAATTTGGGTTGGCACCGAGGATCGGTTGGCAAATTGATCCCTTTGGACATTCAGCTGTGCAAGCCTACTTGTTGGGAGCAGAGGTCGGTTTTGATTCACTATTCTTTGCAAGGATAGATTACCAAGATCGGCAGAAGCGTATGGATGAAAAGAGTCTTGAATTTGTTTGGCAGGGCTCTAAAAGTCTTGGGTCGACAGCTCAGATCTTTGCTGGGGCATTTTGGCAAGGGAACTATGAGCCTCCTACTGGTTTTCATTTTGAAATTAATGATGATGCCCAAGTTGTCCAAGATGATCCTGATTTGTTCGACTACAATGTTCAACAGCGTGTTGATGACTTTGTTGCTTGGGCATTATCACAGGCAAATGTTACTCGAACAAATCATATAATGTGGACAATGGGAACAGATTTCAAGTATCAGTATGCACATACATGGTTCACACAGATGGACAAGCTGATTCATTATGTCAACCTGGATGGACGTGTCAATGCACTCTACTCAACACCAAGTTTATATACGGATGCAAAACATGCTACTCATGTTTCCTGGCCAACAAAAACTGACGATTTCTTCCCATATGCAGATAGAATTAATGCATACTGGACTGGGTACTTTACTAGTAGACCAGCCATTAAGCGATATGTCAGGGAGTTGAGTGGATATTATATGGCAGCAAGACAACTGGAATATTTTATAGGAAGGAGTAATTCAGGCCCCAAGACAGATAATCTAGGAGATGCTTTAGCTATAGCTCAACATCATGATGCTGTCACTGGTACTGAAAAGCAACATGTGGCCAATGACTATGCAAAAAGACTTTCAATCGGTTACGGAGAGGCTGAGGCAGTGGTTGCAGCAGCAATTGGTTGCTTGACCCAATCTTCCCCAGCTACTGGTTGTCAGAACCCTACTACTAAGTTTCAGCAGTGTCCACTTATGAATATAAGTTACTGTCCTGCATCAGAAACTGACCTCTCTCACGGGAAAAACTTGATTGTTGTTATCTATAATCCTCTTGGATGGAAGAGATCAGATGTTGTCCGAATTCCAGTCAGTAGTGAAGATGTTATGGTTCGTGATTATGAAGGAAAGGAGATAGACTCACAAGTTTTACCTATAGCTAATATGCAATTGGGGCTGAGAAACTTCCATTCGGCGTCATACTTTGGGGCAACTGTAAGAGACGCACCCAAGTATTGGCTCGCATTTACAGCATCTGTACCACCTCTTGGGTTCAGCACTTATTCTGTGTCGGGTGCCAAAGGTGCTAAACTGACAACAGCATCTGTTTACACATACCAAGGACATGAGGAGTCTAGTTTTGATATTGGTCCAGGCAATTTGAGACTTACGTTTTCTGAGGAGAATGGCAAAATGACTTATTACAGCAATCAAAGAAATTCGGTTAAGAAATCTGTTGAGGTTTCTTACAGTTACTATCAAGGATTTAATGGAACTGATAAAGATCCTCAGGCTTCAGGGGCATATGTATTCCGTCCTAACGGCACACATCTCATACAGTCTGCAAGGAAGATTCCATCAACAGTTATGCGTGGTCCTCTGATAGATGAAGTACATCAAGAGATTAATTCATGGATATATCAGATCACGAGGCTCTACAAGGAAAAAGAGCATGTTGAAGTCGAATATATGGTTGGGCCTATACCTGTTGATGATGGGATTGGAAAAGAAGTTGTGACCAAAATCGCTACTGAGATGCCGTCAAATAGAACATTTTACACAGATTCAAATGGCCGTGATTTCATTGAAAGGATCCGTGATTATAGATCAGACTGGGATCTGCAAGTGAATGAACCAGTTGCTGGGAATTATTATCCTATTAATCTTGGAATATTCTTGCATGACAATATGAATGAGCTCTCCATTTTGGTGGATAGAGCTGTTGGAGGATCTAGCATATCAGACGGTCAGATAGAGCTTATGCTCCATAGGCGGCTGCTCAAAGATGATGGTAGAGGTGTTGCAGAGGCTTTAAATGAAACAGTTTGTGCCCATGACAAGTGCACAGGCCTAACTATCCAAGGGAAATATTATTTTAGGATTGATCCACTTGGAGGTGGTGCAAAATGGAGACGTTCTTTTGGTCAACAGATATACTCTCCACTTCTTTTGACCTTCGCTGAGCAGGACGAAGATAACTGGATGAATTCTCACATGCCCACCTTTTCAGGAATTGATCCTTCTTACAGCTTACCTGAAAACATTGCTATGATAACGCTTCAGGAGCTTGATGATGGAAAAGTCCTCCTCCGACTAGCACATTTATTCGAGGTCGGAGAAGACAAGGATCTTTCAGTTATGGCAAATGTAGAGCTAAAGCGACTTTTCCCATCGAAGAAGATTAGCAATGTAACAGAAACAAACCTATCTGCCAATCAAGAGAGAGCAGAAATGCAGAAGAAGAGACTGTCATGGAAGGCAAAAGGCTCCCTACCTAATCAGTCCAAGGTTATGAGGGGAGGACCTATCGATCCTGCAAAGCTGGTCGTAGAACTTGGTCCAATGGAGATTCGCACTCTGCTTATTGCATTTAACCAGAAGTCTGACAGAATATTTTATGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100642.p1 GENE.S_Transcript_100642~~S_Transcript_100642.p1 ORF type:complete len:1029 (+),score=171.92,Glyco_hydro_38C|PF07748.9|3.1e-99,Glyco_hydro_38|PF01074.18|2.1e-90,Alpha-mann_mid|PF09261.7|5.6e-20 S_Transcript_100642:243-3329(+)
MKKFSSSSSMAAASIIEVMLVVVSVVIGVVESKYMVYNTSAKIVPGKLNVHMVPHTHDDAGWLKTVDQYYVGSNNSIQVACVRYILDSLIPALQADKNRKFVYVEMAFFMRWWREQSGDMKKVVKGLVNSGQLEIINRGIVMHDEADPHYIDMIDQTTLGHRFLRKEFGLAPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFARIDYQDRQKRMDEKSLEFVWQGSKSLGSTAQIFAGAFWQGNYEPPTGFHFEINDDAQVVQDDPDLFDYNVQQRVDDFVAWALSQANVTRTNHIMWTMGTDFKYQYAHTWFTQMDKLIHYVNLDGRVNALYSTPSLYTDAKHATHVSWPTKTDDFFPYADRINAYWTGYFTSRPAIKRYVRELSGYYMAARQLEYFIGRSNSGPKTDNLGDALAIAQHHDAVTGTEKQHVANDYAKRLSIGYGEAEAVVAAAIGCLTQSSPATGCQNPTTKFQQCPLMNISYCPASETDLSHGKNLIVVIYNPLGWKRSDVVRIPVSSEDVMVRDYEGKEIDSQVLPIANMQLGLRNFHSASYFGATVRDAPKYWLAFTASVPPLGFSTYSVSGAKGAKLTTASVYTYQGHEESSFDIGPGNLRLTFSEENGKMTYYSNQRNSVKKSVEVSYSYYQGFNGTDKDPQASGAYVFRPNGTHLIQSARKIPSTVMRGPLIDEVHQEINSWIYQITRLYKEKEHVEVEYMVGPIPVDDGIGKEVVTKIATEMPSNRTFYTDSNGRDFIERIRDYRSDWDLQVNEPVAGNYYPINLGIFLHDNMNELSILVDRAVGGSSISDGQIELMLHRRLLKDDGRGVAEALNETVCAHDKCTGLTIQGKYYFRIDPLGGGAKWRRSFGQQIYSPLLLTFAEQDEDNWMNSHMPTFSGIDPSYSLPENIAMITLQELDDGKVLLRLAHLFEVGEDKDLSVMANVELKRLFPSKKISNVTETNLSANQERAEMQKKRLSWKAKGSLPNQSKVMRGGPIDPAKLVVELGPMEIRTLLIAFNQKSDRIFYA*

Click here to download the sequence:
Link to NCBI Protein BLAST