Transcript Information: S_Transcript_100655.p1


Annotated TAIR IDAT3G59500.1
Annotated Gene NameIntegral membrane HRF1 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21987110-21988169 | Forward length=269
E-Value7E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9589588614318
Replicate 22.0057081415923
Replicate 32.4387089036166
Condition 2: 8 Hour
Replicate 12.4674005325608
Replicate 24.9920653989473
Replicate 33.1709525362782
Condition 3: 24 Hour
Replicate 14.5134056798748
Replicate 24.1206930138813
Replicate 32.9182530716663


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100655.p1 GENE.S_Transcript_100655~~S_Transcript_100655.p1 ORF type:5prime_partial len:121 (+),score=12.45,YIF1|PF03878.11|7.9e-17 S_Transcript_100655:3-365(+)
AACCCAGAGGCAGTAAACTGGTTGTTCATGAAGGGATTAGTAGGCTGGTTTTTGCAGGTCATGCTGTTAAAACTGTCTCTATTCTCACTCAGTAGCGGGGAAGCACCATTGTTGGATGTTGTGGCATACGCTGGGTATGCATTTACTGGAATCTCTTTGGCCGTCCTTGGGAAGCTCTTGTGGAAGCACTCATACTATTTTTTGATGCCCTGGACCTGCCTGTGCATGGGAGTCTTTTTGTTGAGGACAATGAAGAGAGTTCTTTATGCTGAGGTGAGGAGTTACGACTCCGGCAAGCATCATATACTCTTGCTCTTGATTGTGGCTGCTCAAATTCCACTCTGTCTGGCTCGGCAACATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100655.p1 GENE.S_Transcript_100655~~S_Transcript_100655.p1 ORF type:5prime_partial len:121 (+),score=12.45,YIF1|PF03878.11|7.9e-17 S_Transcript_100655:3-365(+)
NPEAVNWLFMKGLVGWFLQVMLLKLSLFSLSSGEAPLLDVVAYAGYAFTGISLAVLGKLLWKHSYYFLMPWTCLCMGVFLLRTMKRVLYAEVRSYDSGKHHILLLLIVAAQIPLCLARQH*

Click here to download the sequence:
Link to NCBI Protein BLAST