Transcript Information: S_Transcript_100807.p1


Annotated TAIR IDAT1G27220.1
Annotated Gene Namepaired amphipathic helix repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9463806-9465444 | Forward length=184
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2759658126456
Replicate 20.15111499696928
Replicate 30.37896033048494
Condition 2: 8 Hour
Replicate 11.4606431724064
Replicate 21.225854719985
Replicate 31.8979864305805
Condition 3: 24 Hour
Replicate 11.3466024069544
Replicate 21.707547447533
Replicate 31.5547835592195


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100807.p1 GENE.S_Transcript_100807~~S_Transcript_100807.p1 ORF type:3prime_partial len:146 (+),score=24.05,RVT_3|PF13456.2|3.3e-18 S_Transcript_100807:191-625(+)
ATGGAATTTATGACCCGATATACTTCATTTTTGAGTGTTTTTCGTAACCATGGGATAGAATGGATTCTTGGATTCCATAATAGAGCTGCTGCACTTGATGTCCTTTCGGCAGAGCTTATTGCTATAAGGGAAGGATTAAAGTTGATCCTTCAAAAGAATTGCAAGAAAGTTCTTATTCACTCGGATTCTAAACTGGCAATTGACTTGATTCGTAGCGGGAAAGCCTCATCTTATTGGATTCTTAATCTTGTCATGGAGTGCAGGCGACTATTGAAGAGGACCACGGAGGTGAAGCTGGAGCATTGCTTTAGAGAGGAAAATAGGCTAGCTGATAAACTAGCTAATTTGGAACTAGCTATTAACTCTGATGGAAATGTAACTGAAGTGTGGTCTTCACCACCATCTTTTGTATGCAAAACCTATGCTGATGACATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100807.p1 GENE.S_Transcript_100807~~S_Transcript_100807.p1 ORF type:3prime_partial len:146 (+),score=24.05,RVT_3|PF13456.2|3.3e-18 S_Transcript_100807:191-625(+)
MEFMTRYTSFLSVFRNHGIEWILGFHNRAAALDVLSAELIAIREGLKLILQKNCKKVLIHSDSKLAIDLIRSGKASSYWILNLVMECRRLLKRTTEVKLEHCFREENRLADKLANLELAINSDGNVTEVWSSPPSFVCKTYADDM

Click here to download the sequence:
Link to NCBI Protein BLAST