Transcript Information: S_Transcript_100870.p1


Annotated TAIR IDAT5G01720.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:267118-270391 | Reverse length=665
E-Value5E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6126246020607
Replicate 24.7253636759685
Replicate 33.7274911541515
Condition 2: 8 Hour
Replicate 15.7575337356965
Replicate 26.1075484220068
Replicate 34.9833429544074
Condition 3: 24 Hour
Replicate 13.4595969328995
Replicate 22.7346982294235
Replicate 32.8151301447641


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100870.p1 GENE.S_Transcript_100870~~S_Transcript_100870.p1 ORF type:complete len:663 (+),score=90.38,LRR_4|PF12799.3|8.1e+03,LRR_4|PF12799.3|0.78,LRR_4|PF12799.3|0.0034,LRR_4|PF12799.3|0.93,LRR_4|PF12799.3|6.4,LRR_4|PF12799.3|4.6,LRR_4|PF12799.3|1.8,LRR_4|PF12799.3|30,LRR_4|PF12799.3|2.7,LRR_4|PF12799.3|5.6,LRR_4|PF12799.3|17,LRR_4|PF12799.3|1,LRR_4|PF12799.3|30,LRR_4|PF12799.3|0.048,LRR_8|PF13855.2|2.3e+03,LRR_8|PF13855.2|0.006,LRR_8|PF13855.2|1.4e+03,LRR_8|PF13855.2|18,LRR_8|PF13855.2|5.2,LRR_8|PF13855.2|4.3e+03,LRR_8|PF13855.2|30,LRR_8|PF13855.2|24,LRR_8|PF13855.2|1.2e+02,LRR_8|PF13855.2|8.6,LRR_6|PF13516.2|6.8e+03,LRR_6|PF13516.2|6.1e+02,LRR_6|PF13516.2|5.5,LRR_6|PF13516.2|5.3e+03,LRR_6|PF13516.2|7.2,LRR_6|PF13516.2|6.4e+02,LRR_6|PF13516.2|53,LRR_6|PF13516.2|81,LRR_6|PF13516.2|26,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|1.2e+03,LRR_6|PF13516.2|27,LRR_6|PF13516.2|3.6e+02,LRR_6|PF13516.2|1.2e+03,LRR_6|PF13516.2|3.5e+03,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|20,LRR_6|PF13516.2|2e+02,LRR_6|PF13516.2|1.5e+04 S_Transcript_100870:176-2164(+)
ATGCGCAACTTGAACTTGAACATGAACATTGAGGAGGTGCTGAACCCAGAGTTGATATACCAAATACTGGACAAACTGGATCCACAGAGCTTGAAATCCATGTCTCTGGTCTGCAAATCGTTTCATAAGGCCGAGTCTACTCATCGGAAAACCCTGAAGCTCCTCCGACCAGACCTCCTTGACTGTGTCCTTGCCCGTTACCCAGCTCTTTCTCATCTCGACCTTTCTCTCTGCCCTCGCCTTCATGATTCTCTCCTTATAACGGCCTCTTCTTTACATTCCTCCTTGCAATCCCTCAAGATTTCCCCATGTTCGGTAACCGGCTCTGGGATATCGGTTCTGGTATCAAATTGTCCAAATCTGAAAGAGCTGGACCTGTCTCACTCCACACAGCTGAGTGACTCTGCAGCCTCAGCTATTGGTGGGGCCAAGAATCTGGAAAGGCTGACAATGGTGAGATGTAAACAGGTTTCAGATATGGGATTAGCTTGTATTGCTGTTGGCTGTAAGAATCTCAAGTTCCTTAACTTGAAATGGTGCTTGCGTCTTACCGATTCTGGGATTTCACTTGTTGCTCTCAGATGCCCCCTTCTTCGTTCCTTGGATCTCTCCTATGTCCCTATCACAGAGAAGTGCCTTAAGCCAATCTTGCAACTACCTCATCTGGAAGAGTTGGTCCTGATGGCCTGCCATGGCATTGATGACGACGGCCTTCCTTCTCTCCACCAAGCTTCCCACTCTTTGACGACTCTTGATTTGTCCTATTGTCAGAAAATCAGTCACATTGGTCTCTCCCATTTGACTAGAGATGCTCAACTCTTGCACCACATTATCTTGTCCTATGGTTTTGCTATCACTGTAGACTTGGCCAAATGTCTTGAGAAATTCTCAAGGATACAGTGTCTAAAGTTAGATGGATGCACAGTCACTTGTTCTGCTTTGAGAACCATAGGAAACTGGTCTGCCTCCCTGAAAGAACTTAGCTTGAGTAAATGCTCTGGTGTCACTGATGAGGGTATCTCCTCTCTTGTAAAGAGACATACACAAATGAAAAAGCTAGACATTACGTGCTGCCGCAAGATTTCTTCCGTCTCCATTCACTCCATCACTTCCTCATGTACTTCTCTCACTTCCCTTAAAATGGAGGCTTGTGCCCTTGTCTCTAAACAAGCTTTTCCCTTGATTGGTCACCATTGTCTATACTTGGAGGAATTGGATGTCACTGACAATGATTTAGATGATCAAGGTTTGAAGTCCATCTCAAGATGTTCTAGTCTCTCCATCTTGAAGTTAGGGATATGCCTTAATATCACCGATGAAGGGCTGATTCAAGTTGGCATGAACTGCTCTAGGCTTAAGGAGATTGATTTATACCGGGCCATGAGAATAACAGATGTAGGCATTGCATCGGTAGCTCAAGGTTGCCCTACTCTCGAGTTGATTAACATAGCGTATTGTGATCAAGTCACCGATGCCTCTCTAATATCATTATCAAAGTGCTCAAGATTAAAAGCATTGGAAATGAGAGGATGCCCTCATATCACGTCAGTGGGTTTAGCAGCCATTTCTGCAGGATGCAGGCAACTCACTGTACTAGACATAAAGAAATGTTTCAAAATCGACAATTCTGGGATGATTCCACTAGCTCATTATTCTCAAAACCTCAGACAGATAAACTTGTCCTATTGTTCAATTACGGATGTGGGGCTGTTGGCGCTAGCCAGCATAAGCAGATTACAGAACATGACCATCTTGCACCTTGCTGGGCTGAGCCCAAATGGGTTAGCGGCTGCCCTGCTAGCTTGCGGGGGGCTGAGGAAGGTGAAGCTCCATTCTTCCTTTAGAGCTCTGCTTCCTCAATCTCTTCTCGACCACATGGAAAGCCGTGGATGTGTATTTCATTGGAGAGACAAAGCATTTCAGCCTCAGGTTGACGCAGACCCATTGGAGTGGAACCTACAGATAGGAAGACCCCCCTCACCAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100870.p1 GENE.S_Transcript_100870~~S_Transcript_100870.p1 ORF type:complete len:663 (+),score=90.38,LRR_4|PF12799.3|8.1e+03,LRR_4|PF12799.3|0.78,LRR_4|PF12799.3|0.0034,LRR_4|PF12799.3|0.93,LRR_4|PF12799.3|6.4,LRR_4|PF12799.3|4.6,LRR_4|PF12799.3|1.8,LRR_4|PF12799.3|30,LRR_4|PF12799.3|2.7,LRR_4|PF12799.3|5.6,LRR_4|PF12799.3|17,LRR_4|PF12799.3|1,LRR_4|PF12799.3|30,LRR_4|PF12799.3|0.048,LRR_8|PF13855.2|2.3e+03,LRR_8|PF13855.2|0.006,LRR_8|PF13855.2|1.4e+03,LRR_8|PF13855.2|18,LRR_8|PF13855.2|5.2,LRR_8|PF13855.2|4.3e+03,LRR_8|PF13855.2|30,LRR_8|PF13855.2|24,LRR_8|PF13855.2|1.2e+02,LRR_8|PF13855.2|8.6,LRR_6|PF13516.2|6.8e+03,LRR_6|PF13516.2|6.1e+02,LRR_6|PF13516.2|5.5,LRR_6|PF13516.2|5.3e+03,LRR_6|PF13516.2|7.2,LRR_6|PF13516.2|6.4e+02,LRR_6|PF13516.2|53,LRR_6|PF13516.2|81,LRR_6|PF13516.2|26,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|1.2e+03,LRR_6|PF13516.2|27,LRR_6|PF13516.2|3.6e+02,LRR_6|PF13516.2|1.2e+03,LRR_6|PF13516.2|3.5e+03,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|20,LRR_6|PF13516.2|2e+02,LRR_6|PF13516.2|1.5e+04 S_Transcript_100870:176-2164(+)
MRNLNLNMNIEEVLNPELIYQILDKLDPQSLKSMSLVCKSFHKAESTHRKTLKLLRPDLLDCVLARYPALSHLDLSLCPRLHDSLLITASSLHSSLQSLKISPCSVTGSGISVLVSNCPNLKELDLSHSTQLSDSAASAIGGAKNLERLTMVRCKQVSDMGLACIAVGCKNLKFLNLKWCLRLTDSGISLVALRCPLLRSLDLSYVPITEKCLKPILQLPHLEELVLMACHGIDDDGLPSLHQASHSLTTLDLSYCQKISHIGLSHLTRDAQLLHHIILSYGFAITVDLAKCLEKFSRIQCLKLDGCTVTCSALRTIGNWSASLKELSLSKCSGVTDEGISSLVKRHTQMKKLDITCCRKISSVSIHSITSSCTSLTSLKMEACALVSKQAFPLIGHHCLYLEELDVTDNDLDDQGLKSISRCSSLSILKLGICLNITDEGLIQVGMNCSRLKEIDLYRAMRITDVGIASVAQGCPTLELINIAYCDQVTDASLISLSKCSRLKALEMRGCPHITSVGLAAISAGCRQLTVLDIKKCFKIDNSGMIPLAHYSQNLRQINLSYCSITDVGLLALASISRLQNMTILHLAGLSPNGLAAALLACGGLRKVKLHSSFRALLPQSLLDHMESRGCVFHWRDKAFQPQVDADPLEWNLQIGRPPSPN*

Click here to download the sequence:
Link to NCBI Protein BLAST