Transcript Information: S_Transcript_100872.p2


Annotated TAIR IDAT5G01720.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:267118-270391 | Reverse length=665
E-Value2E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27625952839288
Replicate 20
Replicate 30.25526278316402
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.22127177444617
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.26182053015691


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100872.p2 GENE.S_Transcript_100872~~S_Transcript_100872.p2 ORF type:complete len:289 (+),score=37.71,LRR_4|PF12799.3|1.9e+03,LRR_4|PF12799.3|3.5e+02,LRR_4|PF12799.3|0.033,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|2.7,LRR_4|PF12799.3|1.5,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|2.1e+03,LRR_6|PF13516.2|2.1e+02,LRR_6|PF13516.2|1.9,LRR_6|PF13516.2|1.8e+03,LRR_6|PF13516.2|2.5,LRR_6|PF13516.2|2.3e+02,LRR_6|PF13516.2|18,LRR_8|PF13855.2|2.2e+03,LRR_8|PF13855.2|3.6e+03,LRR_8|PF13855.2|7.1e+02,LRR_8|PF13855.2|0.0018,LRR_8|PF13855.2|5.5e+02,LRR_8|PF13855.2|6.2 S_Transcript_100872:176-1042(+)
ATGCGCAACTTGAACTTGAACATGAACATTGAGGAGGTGCTGAACCCAGAGTTGATATACCAAATACTGGACAAACTGGATCCACAGAGCTTGAAATCCATGTCTCTGGTCTGCAAATCGTTTCATAAGGCCGAGTCTACTCATCGGAAAACCCTGAAGCTCCTCCGACCAGACCTCCTTGACTGTGTCCTTGCCCGTTACCCAGCTCTTTCTCATCTCGACCTTTCTCTCTGCCCTCGCCTTCATGATTCTCTCCTTATAACGGCCTCTTCTTTACATTCCTCCTTGCAATCCCTCAAGATTTCCCCATGTTCGGTAACCGGCTCTGGGATATCGGTTCTGGTATCAAATTGTCCAAATCTGAAAGAGCTGGACCTGTCTCACTCCACACAGCTGAGTGACTCTGCAGCCTCAGCTATTGGTGGGGCCAAGAATCTGGAAAGGCTGACAATGGTGAGATGTAAACAGGTTTCAGATATGGGATTAGCTTGTATTGCTGTTGGCTGTAAGAATCTCAAGTTCCTTAACTTGAAATGGTGCTTGCGTCTTACCGATTCTGGGATTTCACTTGTTGCTCTCAGATGCCCCCTTCTTCGTTCCTTGGATCTCTCCTATGTCCCTATCACAGAGAAGTGCCTTAAGCCAATCTTGCAACTACCTCATCTGGAAGAGTTGGTCCTGATGGCCTGCCATGGCATTGATGACGACGGCCTTCCTTCTCTCCACCAAGCTTCCCACTCTTTGACGGTACTCTTTTACTTGCTGTTTATATTTTCTTGTTTCTTCCCAATTAACTACTGTATGTCATGGAGTACTAGTGTACTACTCACTTTCATTTGCTTTTTTATAGGGAATAGTAGTTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100872.p2 GENE.S_Transcript_100872~~S_Transcript_100872.p2 ORF type:complete len:289 (+),score=37.71,LRR_4|PF12799.3|1.9e+03,LRR_4|PF12799.3|3.5e+02,LRR_4|PF12799.3|0.033,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|2.7,LRR_4|PF12799.3|1.5,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|2.1e+03,LRR_6|PF13516.2|2.1e+02,LRR_6|PF13516.2|1.9,LRR_6|PF13516.2|1.8e+03,LRR_6|PF13516.2|2.5,LRR_6|PF13516.2|2.3e+02,LRR_6|PF13516.2|18,LRR_8|PF13855.2|2.2e+03,LRR_8|PF13855.2|3.6e+03,LRR_8|PF13855.2|7.1e+02,LRR_8|PF13855.2|0.0018,LRR_8|PF13855.2|5.5e+02,LRR_8|PF13855.2|6.2 S_Transcript_100872:176-1042(+)
MRNLNLNMNIEEVLNPELIYQILDKLDPQSLKSMSLVCKSFHKAESTHRKTLKLLRPDLLDCVLARYPALSHLDLSLCPRLHDSLLITASSLHSSLQSLKISPCSVTGSGISVLVSNCPNLKELDLSHSTQLSDSAASAIGGAKNLERLTMVRCKQVSDMGLACIAVGCKNLKFLNLKWCLRLTDSGISLVALRCPLLRSLDLSYVPITEKCLKPILQLPHLEELVLMACHGIDDDGLPSLHQASHSLTVLFYLLFIFSCFFPINYCMSWSTSVLLTFICFFIGNSSC*

Click here to download the sequence:
Link to NCBI Protein BLAST