Transcript Information: S_Transcript_100873.p2


Annotated TAIR IDAT5G01720.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:267118-270391 | Reverse length=665
E-Value3E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.42158196606716
Replicate 30
Condition 2: 8 Hour
Replicate 10.40749153472229
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100873.p2 GENE.S_Transcript_100873~~S_Transcript_100873.p2 ORF type:complete len:314 (+),score=39.28,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|2.4e+03,LRR_6|PF13516.2|2.3e+02,LRR_6|PF13516.2|2.1,LRR_6|PF13516.2|2.1e+03,LRR_6|PF13516.2|2.8,LRR_6|PF13516.2|3.4e+02,LRR_6|PF13516.2|20,LRR_4|PF12799.3|2.2e+03,LRR_4|PF12799.3|0.36,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|0.36,LRR_4|PF12799.3|4,LRR_4|PF12799.3|26 S_Transcript_100873:176-1117(+)
ATGCGCAACTTGAACTTGAACATGAACATTGAGGAGGTGCTGAACCCAGAGTTGATATACCAAATACTGGACAAACTGGATCCACAGAGCTTGAAATCCATGTCTCTGGTCTGCAAATCGTTTCATAAGGCCGAGTCTACTCATCGGAAAACCCTGAAGCTCCTCCGACCAGACCTCCTTGACTGTGTCCTTGCCCGTTACCCAGCTCTTTCTCATCTCGACCTTTCTCTCTGCCCTCGCCTTCATGATTCTCTCCTTATAACGGCCTCTTCTTTACATTCCTCCTTGCAATCCCTCAAGATTTCCCCATGTTCGGTAACCGGCTCTGGGATATCGGTTCTGGTATCAAATTGTCCAAATCTGAAAGAGCTGGACCTGTCTCACTCCACACAGCTGAGTGACTCTGCAGCCTCAGCTATTGGTGGGGCCAAGAATCTGGAAAGGCTGACAATGGTGAGATGTAAACAGGTTTCAGATATGGGATTAGCTTGTATTGCTGTTGGCTGTAAGAATCTCAAGTTCCTTAACTTGAAATGGTGCTTGCGTCTTACCGATTCTGGGATTTCACTTGTTGCTCTCAGATGCCCCCTTCTTCGTTCCTTGGATCTCTCCTATGTCCCTGTCAGTAACCATTCTCTCACTTTCTCTATCAACACTCATCCATTTCCTTTTGCTTATTTAACTGTCTGCTGGCAGATCACAGAGAAGTGCCTTAAGCCAATCTTGCAACTACCTCATCTGGAAGAGTTGGTCCTGATGGCCTGCCATGGCATTGATGACGACGGCCTTCCTTCTCTCCACCAAGCTTCCCACTCTTTGACGGTACTCTTTTACTTGCTGTTTATATTTTCTTGTTTCTTCCCAATTAACTACTGTATGTCATGGAGTACTAGTGTACTACTCACTTTCATTTGCTTTTTTATAGGGAATAGTAGTTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100873.p2 GENE.S_Transcript_100873~~S_Transcript_100873.p2 ORF type:complete len:314 (+),score=39.28,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|2.4e+03,LRR_6|PF13516.2|2.3e+02,LRR_6|PF13516.2|2.1,LRR_6|PF13516.2|2.1e+03,LRR_6|PF13516.2|2.8,LRR_6|PF13516.2|3.4e+02,LRR_6|PF13516.2|20,LRR_4|PF12799.3|2.2e+03,LRR_4|PF12799.3|0.36,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|0.36,LRR_4|PF12799.3|4,LRR_4|PF12799.3|26 S_Transcript_100873:176-1117(+)
MRNLNLNMNIEEVLNPELIYQILDKLDPQSLKSMSLVCKSFHKAESTHRKTLKLLRPDLLDCVLARYPALSHLDLSLCPRLHDSLLITASSLHSSLQSLKISPCSVTGSGISVLVSNCPNLKELDLSHSTQLSDSAASAIGGAKNLERLTMVRCKQVSDMGLACIAVGCKNLKFLNLKWCLRLTDSGISLVALRCPLLRSLDLSYVPVSNHSLTFSINTHPFPFAYLTVCWQITEKCLKPILQLPHLEELVLMACHGIDDDGLPSLHQASHSLTVLFYLLFIFSCFFPINYCMSWSTSVLLTFICFFIGNSSC*

Click here to download the sequence:
Link to NCBI Protein BLAST