Transcript Information: S_Transcript_10089.p1


Annotated TAIR IDAT3G63520.1
Annotated Gene Namecarotenoid cleavage dioxygenase 1
Annotated Gene Symbol(s)CCD1, ATCCD1, ATNCED1, NCED1
Annotation TypeOrtholog
Chromosome Positionchr3:23452940-23455896 | Forward length=538
E-Value1.9e-319
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 192.962507261593
Replicate 2102.25171034612
Replicate 395.293508644144
Condition 2: 8 Hour
Replicate 156.769948683134
Replicate 253.358397345045
Replicate 365.580780647153
Condition 3: 24 Hour
Replicate 1125.18963682134
Replicate 2127.4783743479
Replicate 3123.73171882038


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10089.p1 GENE.S_Transcript_10089~~S_Transcript_10089.p1 ORF type:complete len:509 (+),score=95.53,RPE65|PF03055.11|6e-124 S_Transcript_10089:521-2047(+)
ATGGTCAAGTTAATATATGATTCTTCTAAACCCCATCACTGGCTTTCTGGTAACTTCGCTCCTGTTACTACAGAAACCCCTCCTGCCTCCAATTTGACTGTGCACGGCCATCTCCCTGAATGCTTGAATGGGGAGTTTGTTAGGGTTGGCCCCAACCCAAAGTTTGCTCCTGTTGCTGGATATCACTGGTTTGATGGAGATGGCATGATACACGGAATGCGGATTAAAAATGGGAAAGCAACATATGTCTCCCGTTATGTTAGAACATCAAGGATGAAACAAGAAGAGTTCTTTGGAGGAGCGAAATTTATGAAGATTGGAGATCTCAAAGGGCTATTTGGGTTACTTATGGTTAATCTGCAAATGCTGAGAGCAAAAATGAAAGTACTGGATGTCTCATATGGCACGGGGACAGCTAACACTGCTCTTATATATCACCATGGAAAACTTCTGGCACTGTCAGAGGGAGACAAACCTTATGTTCTTCGTGTATTGGAAGATGGAGATCTGCAAACCCTTGGAATGCTGGACTATGATAAGAGGTTGGCCCACTCCTTCACAGCTCATCCAAAAGTTGACCCATTCACAGGAGAGATGTTCACTTTTGGATACTCCCACTCTCCACCATATGTTACATATAGAGTGATATCAAAGGATGGTTACATGCACGATCCAGTACCTATAACCATACCAGCACCTGTCATGATGCACGATTTCGCCATAACTGAAAATTATGCAATTTTCATGGATCTTCCATTATACTTCAGACCTAAGGAAATGGTCAAGGAAAAAAAACTAATTTTCAGTTTTGACTCGACCAAAAAGTCCCGATTTGGTGTACTACCTCGATATGCGAAGAATGAGAGTCTAATCAAATGGTTTGAGCTTCCAAATTGCTTCATATTCCATAATGCCAATGCATGGGAGGAAGGAGATGAGATTGTTTTAATCACCTGTCGCCTTGAGAATCCAGATTTAGATATGATCAGTGGAGGTGTCAAAGACAAGCTTGAAAATTTCGCAAATGAGCTGTATGAAATGAGATTCAACATGAAATCTGGTCTTGCTTCTCAAAGAAAACTATCTGGATCTGCTGTGGACTTCCCTAGAATCAATGAAAACTACACTGGAAGGAAGCAGAGATATGTCTATGGTACTATCTTGGACAGCATAGCCAAAGTACAAGGAATAGTCAAATGTGACTTACATGCTGAACCAGATGCCAGCCAAACAAAGATTGAGGTGGGAGGCACCGTGCAAGGAATCTTTGACCTTGGTCCAGGAAGATTTGGGTCAGAGGCTATCTTTGTGCCTCGAGAACCCGGTACCACTGGTGAAGAGGATGATGGATATCTAATTTTTTTCGTGCATGATGAAAATACTGGAAAGTCATATGTCAATGTAATTGATGCAAAAACCATGTCAGCTGATCCCGTTGCAGTTGTTGAGTTACCCAATAGAGTTCCTTATGGGTTTCATGCATTCTTTGTCACAGAGGATCAACTGAAAGAACAAGAAGCAGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10089.p1 GENE.S_Transcript_10089~~S_Transcript_10089.p1 ORF type:complete len:509 (+),score=95.53,RPE65|PF03055.11|6e-124 S_Transcript_10089:521-2047(+)
MVKLIYDSSKPHHWLSGNFAPVTTETPPASNLTVHGHLPECLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGMRIKNGKATYVSRYVRTSRMKQEEFFGGAKFMKIGDLKGLFGLLMVNLQMLRAKMKVLDVSYGTGTANTALIYHHGKLLALSEGDKPYVLRVLEDGDLQTLGMLDYDKRLAHSFTAHPKVDPFTGEMFTFGYSHSPPYVTYRVISKDGYMHDPVPITIPAPVMMHDFAITENYAIFMDLPLYFRPKEMVKEKKLIFSFDSTKKSRFGVLPRYAKNESLIKWFELPNCFIFHNANAWEEGDEIVLITCRLENPDLDMISGGVKDKLENFANELYEMRFNMKSGLASQRKLSGSAVDFPRINENYTGRKQRYVYGTILDSIAKVQGIVKCDLHAEPDASQTKIEVGGTVQGIFDLGPGRFGSEAIFVPREPGTTGEEDDGYLIFFVHDENTGKSYVNVIDAKTMSADPVAVVELPNRVPYGFHAFFVTEDQLKEQEAV*

Click here to download the sequence:
Link to NCBI Protein BLAST